RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 LINC00470Q9BZP3 86 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 ABCA1O95477 2261 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 PKDREJQ9NTG1 2253 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 IGHV3OR16-13A0A075B7E8 117 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 IGHV3-49A0A0A0MS15 119 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 PMS2P5A8MQ11 134 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 CDX4O14627 284 aaPredicted RBP3.48□□□□□ -1.85
BRCA2-201ENST00000380152 ERVK11-1P61568 191 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 DNM1P46Q6ZS02 220 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 OR2K2Q8NGT1 345 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 OSR1Q8TAX0 266 aaPredicted RBP3.48□□□□□ -1.85
BRCA2-201ENST00000380152 CUBNO60494 3623 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 CFPP27918 469 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 LEPP41159 167 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 FAM27E3Q08E93 113 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 TDRG1Q3Y452 100 aa3.48□□□□□ -1.85
BRCA2-201ENST00000380152 SVEP1Q4LDE5 3571 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 SH2D7A6NKC9 451 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 LINC00473A8K010 186 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 D6R8Y8 96 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 SS18L1O75177 396 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ADIPOQQ15848 244 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 OR9G1Q8NH87 305 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IFI27L2Q9H2X8 130 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ST20Q9HBF5 79 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGKV1D-33P01593 117 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGKV1-33P01594 117 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 HBDP02042 147 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 LINC00271P0C7V0 271 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ATP5L2Q7Z4Y8 100 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TTC9CQ8N5M4 171 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CACNG8Q8WXS5 425 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IQCF6A8MYZ5 107 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 KIR3DL3Q8N743 410 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 OR5AN1Q8NGI8 311 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TRAV8-2A0A0B4J237 113 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TRAV3A0A0B4J244 114 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CLPSP04118 112 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CECR9P0C854 216 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 PSG3Q16557 428 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 GGNQ86UU5 652 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 C8orf46Q8TAG6 207 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 VOPP1Q96AW1 172 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGLV3-12A0A075B6K2 115 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGKV1-16P04430 117 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CIRBPQ14011 172 aaKnown RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ZNF56Q15929 161 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 SPATA31B1PQ5VZV4 182 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TMEM14EPQ6UXP3 125 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TEX45Q8NA69 505 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 DEFB104AQ8WTQ1 72 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGKV3D-20A0A0C4DH25 116 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IGHV1-69-2A0A0G2JMI3 117 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 HOXA3O43365 443 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 PAX9P55771 341 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 MRPL14Q6P1L8 145 aaKnown RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CIARTQ8N365 385 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ARHGAP32A7KAX9 2087 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 TRAV30A0A087WSZ9 112 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 A0A1W2PR77 199 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 FOXG1P55316 489 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CCDC144NLQ6NUI1 221 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ZIC4Q8N9L1 334 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 C9JCJ5 164 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 NPPCP23582 126 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 RPS20P60866 119 aaKnown RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 METRNQ9UJH8 293 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 NDUFS8O00217 210 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CRYGSP22914 178 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 CACNG7P62955 275 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 FOXC1Q12948 553 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 ZNF585BQ52M93 769 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 SCGB3A1Q96QR1 104 aa3.47□□□□□ -1.85
BRCA2-201ENST00000380152 MRPS18CQ9Y3D5 142 aaKnown RBP3.47□□□□□ -1.85
BRCA2-201ENST00000380152 IL18BPO95998 194 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 IGKCP01834 107 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 GAGE13Q4V321 117 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 ZNF257Q9Y2Q1 563 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 IGHV3OR16-12A0A075B7B8 117 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 CCL3L1P16619 93 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 ATP5IP56385 69 aaPredicted RBP3.46□□□□□ -1.85
BRCA2-201ENST00000380152 UNQ6494/PRO21346Q6UXR6 183 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 FAM216BQ8N7L0 139 aa3.46□□□□□ -1.85
BRCA2-201ENST00000380152 UBE2L6O14933 153 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 ATP5LO75964 103 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 ESDP10768 282 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 MLANAQ16655 118 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 LCNL1Q6ZST4 164 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 CLEC7AQ9BXN2 247 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 PLAURQ03405 335 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 PRSS8Q16651 343 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 BCL6BQ8N143 479 aaPredicted RBP3.46□□□□□ -1.86
BRCA2-201ENST00000380152 SFXN3Q9BWM7 321 aa3.46□□□□□ -1.86
BRCA2-201ENST00000380152 SLC25A39Q9BZJ4 359 aaPredicted RBP3.46□□□□□ -1.86
BRCA2-201ENST00000380152 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.46□□□□□ -1.861e-6■■■■□ 25.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms