RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SIRPDQ9H106 197 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 OR51M1Q9H341 326 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 MRPL36Q9P0J6 103 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HILPDAQ9Y5L2 63 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 ZNF98A6NK75 572 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 OVOL3O00110 214 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 GNG4P50150 75 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 TAS2R60P59551 318 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 C5orf64Q2M2E5 130 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 OR5T1Q8NG75 326 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 GSX1Q9H4S2 264 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-201ENST00000379340 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 I3L2K1 104 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 PHOX2AO14813 284 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 HYPMO75409 117 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 OR10J4P0C629 311 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 TRGC1P0CF51 173 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 CRYBB3P26998 211 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 NDUFA6P56556 154 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 TIGITQ495A1 244 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 LINC00305Q7Z4B0 112 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 LHFPL4Q7Z7J7 247 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 Q8N6K4 173 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 NRGNQ92686 78 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 FRZBQ92765 325 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 C12orf57Q99622 126 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 ELOVL1Q9BW60 279 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 WNT10AQ9GZT5 417 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 FLNAP21333 2647 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 AKAP6Q13023 2319 aa8.32□□□□□ -1.08
POLR2J3-201ENST00000379340 JMJD1CQ15652 2540 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 NPIPB5A8MRT5 1133 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 FCN1O00602 326 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 ZFP36P26651 326 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 PDLIM4P50479 330 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 UBE2E1P51965 193 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 RPL19P84098 196 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 HES1Q14469 280 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 FXYD3Q14802 87 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 CENPWQ5EE01 88 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 ZNF48Q96MX3 618 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 LPAR2Q9HBW0 351 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 IL36BQ9NZH7 164 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 C1RLQ9NZP8 487 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 TRAV5A0A0B4J249 113 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 PGPEP1LA6NFU8 196 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 NDUFS7O75251 213 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 TOX4O94842 621 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 IGHV3-48P01763 117 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 IGLC1P0CG04 106 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 CNN1P51911 297 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 LMO4P61968 165 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 ACTL10Q5JWF8 245 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 ZNF562Q6V9R5 426 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 OR1B1Q8NGR6 318 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 OSTCQ9NRP0 149 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 PITPNC1Q9UKF7 332 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 CDC42EP3Q9UKI2 254 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 HIGD1AQ9Y241 93 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 DMRT1Q9Y5R6 373 aa8.31□□□□□ -1.08
POLR2J3-201ENST00000379340 ABCA4P78363 2273 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 K7EN84 100 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 GCGP01275 180 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 ORM2P19652 201 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 S100A2P29034 98 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 BRS3P32247 399 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 ZNF329Q86UD4 541 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 TTC9CQ8N5M4 171 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 SGMS2Q8NHU3 365 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 ARPC1AQ92747 370 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 SMIM12Q96EX1 92 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 IGF2BP2-AS1Q96M15 143 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 TMEM14CQ9P0S9 112 aa8.3□□□□□ -1.08
POLR2J3-201ENST00000379340 A0A0U1RQK1 487 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 ZNF320A2RRD8 509 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 K7EIM0 57 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 ISLRO14498 428 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 FAM106CPP0CH98 169 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 APELAP0DMC3 54 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 PYYP10082 97 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 TMEM11P17152 192 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 MYCNOSP40205 109 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 S100A12P80511 92 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 RPEL1Q2QD12 228 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 COX19Q49B96 90 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 IGFBPL1Q8WX77 278 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 TBX15Q96SF7 602 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 BPESC1Q9GZL8 116 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms