RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 FAM27E3Q08E93 113 aa13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 PRR31Q5SQ13 230 aa13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 ZNF788Q6ZQV5 615 aa13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 SLC25A48Q6ZT89 311 aaKnown RBP13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 SH2D7A6NKC9 451 aaPredicted RBP13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 MORN5Q5VZ52 161 aa13.43□□□□□ -0.26
PCDHA1-201ENST00000378133 SAA1P0DJI8 122 aaPredicted RBP13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 URB1-AS1Q96HZ7 61 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 SLC25A2Q9BXI2 301 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 hDV102S1A0JD36 115 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 GOSR1O95249 250 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 BVES-AS1Q5T3Y7 98 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 FAM167A-AS1Q96KT0 104 aa13.42□□□□□ -0.26
PCDHA1-201ENST00000378133 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 OR2T8A6NH00 312 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 CRXO43186 299 aaPredicted RBP13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 RNASE2P10153 161 aaKnown RBP13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 CCL8P80075 99 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 SLC25A34Q6PIV7 304 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 MRPL32Q9BYC8 188 aaKnown RBP13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 LINC00574Q9H8X3 128 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 VWC2LB2RUY7 222 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 SYS1-DBNDD2H3BUS1 97 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 CORTO00230 105 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 HIST1H1EP10412 219 aaKnown RBP13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 FAM162BQ5T6X4 162 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 AMMECR1LQ6DCA0 310 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 DEFB125Q8N687 156 aa13.41□□□□□ -0.26
PCDHA1-201ENST00000378133 MUC21A0A0G2JKD1 596 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 MUC21A0A140T8X8 626 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 PEX7O00628 323 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 PYYP10082 97 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 MUC21Q5SSG8 566 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 FAM120AOSQ5T036 256 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 ZCCHC24Q8N2G6 241 aaKnown RBP13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
PCDHA1-201ENST00000378133 E7EUB6 86 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 CEACAM4O75871 244 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 REG1BP48304 166 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 CFAP161Q6P656 301 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 SMIM12Q96EX1 92 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 MEGF9Q9H1U4 602 aa13.4□□□□□ -0.27
PCDHA1-201ENST00000378133 hADV38S2A0JD32 116 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 LEPROTL1O95214 131 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 CD40P25942 277 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 CD69Q07108 199 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 C12orf54Q6X4T0 127 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 ZNF329Q86UD4 541 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 HARBI1Q96MB7 349 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 TOX4O94842 621 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 OR1L8Q8NGR8 309 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 C1RLQ9NZP8 487 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 PCNX1Q96RV3 2341 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 PLXNB1O43157 2135 aa13.39□□□□□ -0.27
PCDHA1-201ENST00000378133 IGHV1-24A0A0C4DH33 117 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 CCL3L1P16619 93 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 CD24P25063 80 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 TCF24Q7RTU0 167 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 DCHS1Q96JQ0 3298 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 PSMB11A5LHX3 300 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 HBBP68871 147 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 NHLH1Q02575 133 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 TMEM191AQ9H0A3 160 aa13.38□□□□□ -0.27
PCDHA1-201ENST00000378133 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 SSBP2P81877 361 aaPredicted RBP13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 ZNF833PQ6ZTB9 187 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 SGK494Q96LW2 274 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 IGF2-ASQ6U949 168 aa13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 CHCHD1Q96BP2 118 aaKnown RBP13.37□□□□□ -0.27
PCDHA1-201ENST00000378133 K7ERU9 68 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 GNG5P63218 68 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 OSR1Q8TAX0 266 aaPredicted RBP13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 SAP30O75446 220 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 APOA2P02652 100 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 C10orf113Q5VZT2 155 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
PCDHA1-201ENST00000378133 K7EM74 188 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 PSG9Q00887 426 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 DIAPH2-AS1Q14236 149 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms