RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DEFB131AP59861 70 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 GAMTQ14353 236 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 USF2Q15853 346 aaPredicted RBP12.42□□□□□ -0.42
HMGN4-201ENST00000377575 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 OR51G1Q8NGK1 321 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 PFDN2Q9UHV9 154 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 K7EQG2 157 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 WRBO00258 174 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 ADAP1O75689 374 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 ANXA7P20073 488 aaKnown RBP12.41□□□□□ -0.42
HMGN4-201ENST00000377575 GLMPQ8WWB7 406 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 RNF183Q96D59 192 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 CSTL1Q9H114 145 aa12.41□□□□□ -0.42
HMGN4-201ENST00000377575 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 LYRM1O43325 122 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 OR8G2PQ6IF36 304 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 STHQ8IWL8 128 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 FAM24BQ8N5W8 94 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 DCANP1Q8TF63 244 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 CCDC32Q9BV29 185 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 PBDC1Q9BVG4 233 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
HMGN4-201ENST00000377575 IGKV1D-37A0A075B6S9 117 aa12.39□□□□□ -0.43
HMGN4-201ENST00000377575 NKX2-1P43699 371 aaPredicted RBP12.39□□□□□ -0.43
HMGN4-201ENST00000377575 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
HMGN4-201ENST00000377575 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
HMGN4-201ENST00000377575 TRGV9Q99603 122 aa12.39□□□□□ -0.43
HMGN4-201ENST00000377575 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
HMGN4-201ENST00000377575 H3BP45 60 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 BUB3O43684 328 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 LYZP61626 148 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 ID3Q02535 119 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 ZNF90Q03938 601 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 LINC00299Q6ZSB3 139 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 OR4D5Q8NGN0 318 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 LYSTQ99698 3801 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 RYR3Q15413 4870 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 DYNC2H1Q8NCM8 4307 aaKnown RBP12.38□□□□□ -0.43
HMGN4-201ENST00000377575 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
HMGN4-201ENST00000377575 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 SNRPGP15A8MWD9 76 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 PLA2G10O15496 165 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 SSSCA1O60232 199 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 CA1P00915 261 aaPredicted RBP12.37□□□□□ -0.43
HMGN4-201ENST00000377575 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
HMGN4-201ENST00000377575 POLR2GP62487 172 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN4-201ENST00000377575 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 MITD1Q8WV92 249 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 NRN1Q9NPD7 142 aa12.37□□□□□ -0.43
HMGN4-201ENST00000377575 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
HMGN4-201ENST00000377575 AKR1C1Q04828 323 aa12.36□□□□□ -0.43
HMGN4-201ENST00000377575 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
HMGN4-201ENST00000377575 S100ZQ8WXG8 99 aa12.36□□□□□ -0.43
HMGN4-201ENST00000377575 PSENENQ9NZ42 101 aa12.36□□□□□ -0.43
HMGN4-201ENST00000377575 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
HMGN4-201ENST00000377575 AGRNO00468 2067 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 SCGB1D2O95969 90 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 TCRBP04435 133 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 ATF4P18848 351 aaPredicted RBP12.35□□□□□ -0.43
HMGN4-201ENST00000377575 OR2F1Q13607 317 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 TMEM41BQ5BJD5 291 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 ACOT7LQ6ZUV0 252 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
HMGN4-201ENST00000377575 NUDT15Q9NV35 164 aa12.35□□□□□ -0.43
HMGN4-201ENST00000377575 TRAV6A0A075B6T7 132 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 IGKV1OR2-108A0A075B7D4 117 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 LCE6AA0A183 80 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 SPP1P10451 314 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 C1orf194Q5T5A4 169 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
HMGN4-201ENST00000377575 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
HMGN4-201ENST00000377575 ZBTB8BQ8NAP8 495 aaPredicted RBP12.34□□□□□ -0.43
HMGN4-201ENST00000377575 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 RARRES2Q99969 163 aa12.34□□□□□ -0.43
HMGN4-201ENST00000377575 SMCO3A2RU48 225 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 S100A7P31151 101 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 ACTL10Q5JWF8 245 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 BPIFCQ8NFQ6 507 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 GSKIPQ9P0R6 139 aa12.33□□□□□ -0.44
HMGN4-201ENST00000377575 CXorf65A6NEN9 183 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 JTBO76095 146 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 MZT2BQ6NZ67 158 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 TMEM144Q7Z5S9 345 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
HMGN4-201ENST00000377575 FAM240BA0A1B0GVZ2 78 aa12.31□□□□□ -0.44
HMGN4-201ENST00000377575 TSC22D2O75157 780 aa12.31□□□□□ -0.44
HMGN4-201ENST00000377575 TAS2R30P59541 319 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms