RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PRR20DP86480 221 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 PRR20BP86481 221 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 PRR20AP86496 221 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 RTL8BQ17RB0 113 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
VRK3-202ENST00000377011 FAM78BQ5VT40 261 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 ABHD12Q8N2K0 398 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 TRAPPC1Q9Y5R8 145 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 TMEM89A2RUT3 159 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 RNASE1P07998 156 aaKnown RBP9.86□□□□□ -0.83
VRK3-202ENST00000377011 CHRNA7P36544 502 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 UBE2G2P60604 165 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 PRCDQ00LT1 54 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 SCGB2A2Q13296 93 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 SLC25A48Q6ZT89 311 aaKnown RBP9.86□□□□□ -0.83
VRK3-202ENST00000377011 VKORC1L1Q8N0U8 176 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 TMEM167BQ9NRX6 74 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 ZNRD1Q9P1U0 126 aa9.86□□□□□ -0.83
VRK3-202ENST00000377011 ZNF320A2RRD8 509 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 INS-IGF2F8WCM5 200 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 UPK2O00526 184 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 DEFA4P12838 97 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 UBE2E1P51965 193 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 C2orf83Q53S99 150 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 C1orf122Q6ZSJ8 110 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
VRK3-202ENST00000377011 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
VRK3-202ENST00000377011 OR10G8Q8NGN5 311 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 PLEKHA3Q9HB20 300 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 BET1LQ9NYM9 111 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 hADV38S2A0JD32 116 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 ZNF705GA8MUZ8 300 aaPredicted RBP9.85□□□□□ -0.83
VRK3-202ENST00000377011 CA2P00918 260 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 IER3P46695 156 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 PAFAH1B2P68402 229 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 MEF2CQ06413 473 aaPredicted RBP9.85□□□□□ -0.83
VRK3-202ENST00000377011 FBLN7Q53RD9 439 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 TEX38Q6PEX7 206 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 OR1L8Q8NGR8 309 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 LINC00312Q9Y6C7 94 aa9.85□□□□□ -0.83
VRK3-202ENST00000377011 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 A0A1B0GV90 55 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 SCO2A0A1W2PP80 73 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 IGHV1-8P0DP01 117 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 SELENOTP62341 195 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 RPL19P84098 196 aaKnown RBP9.84□□□□□ -0.83
VRK3-202ENST00000377011 FAM71F2Q6NXP2 309 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 SGMS2Q8NHU3 365 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 OSR1Q8TAX0 266 aaPredicted RBP9.84□□□□□ -0.83
VRK3-202ENST00000377011 JMJD8Q96S16 334 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 RNF2Q99496 336 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 DERL1Q9BUN8 251 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 GAL3ST2Q9H3Q3 398 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
VRK3-202ENST00000377011 YTHDF2Q9Y5A9 579 aaKnown RBP9.84□□□□□ -0.83
VRK3-202ENST00000377011 TRBV9A0A0B4J1U6 114 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 J3QR06 171 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 OR10J4P0C629 311 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 LINC00869P0C866 280 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 ESDP10768 282 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 OR10J1P30954 320 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 TAS2R45P59539 299 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 C1orf194Q5T5A4 169 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 PQLC2Q6ZP29 291 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 ZNF833PQ6ZTB9 187 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 PIFOQ8TCI5 191 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 SSMEM1Q8WWF3 244 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 SLC35D1Q9NTN3 355 aa9.83□□□□□ -0.84
VRK3-202ENST00000377011 TECRQ9NZ01 308 aaKnown RBP9.83□□□□□ -0.84
VRK3-202ENST00000377011 ODF3BA8MYP8 253 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 BPIFB3P59826 476 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 ERVFC1-1P60608 527 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 COX19Q49B96 90 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 HIST2H2BDQ6DRA6 164 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 OR4A5Q8NH83 315 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 CACNG8Q8WXS5 425 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 ZNF714Q96N38 554 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 MRPL32Q9BYC8 188 aaKnown RBP9.82□□□□□ -0.84
VRK3-202ENST00000377011 SEPSECSQ9HD40 501 aaKnown RBP9.82□□□□□ -0.84
VRK3-202ENST00000377011 C1RLQ9NZP8 487 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 APOA2P02652 100 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 OR5G3P0C626 314 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 CT45A6P0DMU7 189 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 CT45A5P0DMU8 189 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 CT45A7P0DMV0 189 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 COMPP49747 757 aaPredicted RBP9.82□□□□□ -0.84
VRK3-202ENST00000377011 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 LY6EQ16553 131 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 OR5T1Q8NG75 326 aa9.82□□□□□ -0.84
VRK3-202ENST00000377011 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms