RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.77
NPLOC4-202ENST00000374747 IQCF6A8MYZ5 107 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 CD55P08174 381 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 PDLIM4P50479 330 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 SRSF1Q07955 248 aaKnown RBP eCLIP10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 SFTA2Q6UW10 78 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 SLC25A2Q9BXI2 301 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 YPEL1O60688 119 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 CXCL1P09341 107 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 PAX2Q02962 417 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 FAM201AQ5SY85 155 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 MDS2Q8NDY4 140 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 YPEL2Q96QA6 119 aa10.21□□□□□ -0.78
NPLOC4-202ENST00000374747 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 FHL1Q13642 323 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 ACACAQ13085 2346 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 SAA2-SAA4A0A096LPE2 208 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 IFI27P40305 119 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 PVRIGQ6DKI7 326 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 ATP5L2Q7Z4Y8 100 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 C2orf16Q68DN1 1984 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 A6NNC1 897 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 IGHV4-39P01824 125 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 TSKUQ8WUA8 353 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 MS4A6AQ9H2W1 248 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 NDUFS8O00217 210 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 EFNB3Q15768 340 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 WDR83OSQ9Y284 106 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 IGKCP01834 107 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 GFI1BQ5VTD9 330 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 GLRX5Q86SX6 157 aa10.2□□□□□ -0.78
NPLOC4-202ENST00000374747 ATP5J2P56134 94 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF524Q96C55 264 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 WBP1Q96G27 269 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF407Q9C0G0 2248 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 IGHV3OR16-10A0A075B7F0 116 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 A8MWV9 139 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 PYYP10082 97 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 ORMDL2Q53FV1 153 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 CLEC19AQ6UXS0 136 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF497Q6ZNH5 498 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 YAE1D1Q9NRH1 226 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 A0A1B0GW64 132 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 GHRHP01286 108 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 PAQR4Q8N4S7 273 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 SHANK1Q9Y566 2161 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 RAMP3O60896 148 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 BSPH1Q075Z2 132 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 PSG8Q9UQ74 426 aa10.19□□□□□ -0.78
NPLOC4-202ENST00000374747 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 FAM90A9PA6NNJ1 464 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 CELA3BP08861 270 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 TIMP3P35625 211 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 C1orf194Q5T5A4 169 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 JMJD8Q96S16 334 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 GFI1Q99684 422 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 CKS1BP61024 79 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 GAGE13Q4V321 117 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 OR9G4Q8NGQ1 327 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 RNF125Q96EQ8 232 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 SPAG8Q99932 426 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 TRAV12-3A0A0B4J271 114 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 RNASE6Q93091 150 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 VSIRQ9H7M9 311 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 CHTOPQ9Y3Y2 248 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 E9PLN8 166 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 DLEU1O43261 78 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 CRYGSP22914 178 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 PLNP26678 52 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 FOXL1Q12952 345 aa10.18□□□□□ -0.78
NPLOC4-202ENST00000374747 TRAV1-1A0A0B4J248 108 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 HAX1O00165 279 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 GZMBP10144 247 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 MORN2Q502X0 79 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 NABP1Q96AH0 204 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 CYTL1Q9NRR1 136 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 A0A0A6YYD4 124 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 PRCDQ00LT1 54 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 DPH3Q96FX2 82 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms