RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 NAP1L6A6NFF2 107 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 ZFP92A6NM28 416 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 BUB3O43684 328 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 CFDP00746 253 aaPredicted RBP13.84□□□□□ -0.19
TMEM53-201ENST00000372235 ZNF688P0C7X2 276 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 TRPT1Q86TN4 253 aaKnown RBP13.84□□□□□ -0.19
TMEM53-201ENST00000372235 CCDC190Q86UF4 302 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 CENPSQ8N2Z9 138 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 C11orf45Q8TAV5 145 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 LINC00476Q8WZB0 136 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 NRN1Q9NPD7 142 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 PRR13Q9NZ81 148 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 FBXL17Q9UF56 701 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 LYSTQ99698 3801 aa13.84□□□□□ -0.19
TMEM53-201ENST00000372235 PITX3O75364 302 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 SFT2D2O95562 160 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 PSG1P11464 419 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 USF2Q15853 346 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-201ENST00000372235 SAMD13Q5VXD3 122 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 PHLDA1Q8WV24 401 aaPredicted RBP13.83□□□□□ -0.2
TMEM53-201ENST00000372235 RNF125Q96EQ8 232 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
TMEM53-201ENST00000372235 SNRPGP15A8MWD9 76 aa13.82□□□□□ -0.2
TMEM53-201ENST00000372235 MIFP14174 115 aa13.82□□□□□ -0.2
TMEM53-201ENST00000372235 TCTAP57738 103 aa13.82□□□□□ -0.2
TMEM53-201ENST00000372235 ZNF79Q15937 498 aa13.82□□□□□ -0.2
TMEM53-201ENST00000372235 C1orf194Q5T5A4 169 aa13.82□□□□□ -0.2
TMEM53-201ENST00000372235 LY6G6CO95867 125 aa13.81□□□□□ -0.2
TMEM53-201ENST00000372235 EWSR1Q01844 656 aaKnown RBP eCLIP13.81□□□□□ -0.2
TMEM53-201ENST00000372235 GAMTQ14353 236 aa13.81□□□□□ -0.2
TMEM53-201ENST00000372235 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
TMEM53-201ENST00000372235 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
TMEM53-201ENST00000372235 HRH4Q9H3N8 390 aa13.81□□□□□ -0.2
TMEM53-201ENST00000372235 CENPXA8MT69 81 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 ID1P41134 155 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 GGNBP1Q5YKI7 109 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 TRIQKQ629K1 86 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 RAB40CQ96S21 281 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 TRGV9Q99603 122 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 PBDC1Q9BVG4 233 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
TMEM53-201ENST00000372235 C11orf94C9JXX5 98 aa13.79□□□□□ -0.2
TMEM53-201ENST00000372235 SYNGR2O43760 224 aa13.79□□□□□ -0.2
TMEM53-201ENST00000372235 PPP1R1AQ13522 171 aa13.79□□□□□ -0.2
TMEM53-201ENST00000372235 CNPY1Q3B7I2 92 aa13.79□□□□□ -0.2
TMEM53-201ENST00000372235 COQ8AQ8NI60 647 aa13.79□□□□□ -0.2
TMEM53-201ENST00000372235 RBM38Q9H0Z9 239 aaKnown RBP13.79□□□□□ -0.2
TMEM53-201ENST00000372235 NKX2-1P43699 371 aaPredicted RBP13.78□□□□□ -0.2
TMEM53-201ENST00000372235 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
TMEM53-201ENST00000372235 PAIP2BQ9ULR5 123 aaKnown RBP13.78□□□□□ -0.2
TMEM53-201ENST00000372235 SLC45A2Q9UMX9 530 aa13.78□□□□□ -0.2
TMEM53-201ENST00000372235 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
TMEM53-201ENST00000372235 ZNF705EA8MWA4 302 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-201ENST00000372235 IFNA21P01568 189 aa13.77□□□□□ -0.21
TMEM53-201ENST00000372235 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
TMEM53-201ENST00000372235 PPP1R14BQ96C90 147 aa13.77□□□□□ -0.21
TMEM53-201ENST00000372235 C7orf50Q9BRJ6 194 aaKnown RBP13.77□□□□□ -0.21
TMEM53-201ENST00000372235 NDUFB6O95139 128 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 HOXB5P09067 269 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 IAPPP10997 89 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 MEOX2P50222 304 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 LYZP61626 148 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 C2CD4CQ8TF44 421 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 TBC1D24Q9ULP9 559 aa13.76□□□□□ -0.21
TMEM53-201ENST00000372235 STRAPQ9Y3F4 350 aaKnown RBP13.76□□□□□ -0.21
TMEM53-201ENST00000372235 IGKV1D-37A0A075B6S9 117 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 WRBO00258 174 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 PSMB3P49720 205 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
TMEM53-201ENST00000372235 ZNF90Q03938 601 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 LGALS9CQ6DKI2 356 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 OR8I2Q8N0Y5 310 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 Q8NAQ8 132 aa13.75□□□□□ -0.21
TMEM53-201ENST00000372235 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 H3BMM0 161 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 GIG44P09565 113 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-201ENST00000372235 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 BPIFCQ8NFQ6 507 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 GPR82Q96P67 336 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
TMEM53-201ENST00000372235 ISLRO14498 428 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 C4BPBP20851 252 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 GALR1P47211 349 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 SPANXN5Q5MJ07 72 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 CLUHP3Q96NS8 147 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 MAGT1Q9H0U3 335 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 RNF24Q9Y225 148 aa13.73□□□□□ -0.21
TMEM53-201ENST00000372235 DNAH1Q9P2D7 4330 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 IGHV4-28A0A0C4DH34 117 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 ID3Q02535 119 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 FOXI2Q6ZQN5 318 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 CSNK1G2-AS1Q8NCQ2 148 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 OR4D5Q8NGN0 318 aa13.72□□□□□ -0.21
TMEM53-201ENST00000372235 DEFB4AO15263 64 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms