RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 HIST1H2BNQ99877 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BMQ99879 126 aa11.08□□□□□ -0.64
RAPGEF1-201ENST00000372189 TANC1Q9C0D5 1861 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 WDR82Q6UXN9 313 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 HEPN1Q6WQI6 88 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 CNTFRP26992 372 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 EFNA4P52798 201 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 EFNA2O43921 213 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGHV1-46P01743 117 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 NPSP0C0P6 89 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 C1QTNF4Q9BXJ3 329 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 SVILO95425 2214 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 GPX1P07203 203 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 Q6AWC8 147 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 TICRRQ7Z2Z1 1910 aa11.07□□□□□ -0.64
RAPGEF1-201ENST00000372189 C17orf98A8MV24 154 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 WFDC12Q8WWY7 111 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 AHCTF1Q8WYP5 2266 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 FAM89BQ8N5H3 189 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 WFDC11Q8NEX6 87 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 PPDPFLQ8WWR9 84 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 SPTBP11277 2137 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 FAM240AA0A1B0GVK7 77 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 TSPOP30536 169 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 KIR3DL3Q8N743 410 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 CCL3L1P16619 93 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 OR9G4Q8NGQ1 327 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
RAPGEF1-201ENST00000372189 H0YIZ8 118 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 MBD3L4A6NDZ8 208 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 MBD3L3A6NE82 208 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 MBD3L5A6NJ08 208 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 MBD3L2Q8NHZ7 208 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 PROB1E7EW31 1015 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 SSC4DQ8WTU2 575 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 FOXI3A8MTJ6 420 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGHG3P01860 377 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 PSG3Q16557 428 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 ZNF672Q499Z4 452 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 CD5LO43866 347 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGHV3-48P01763 117 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 PLPPR1Q8TBJ4 325 aa11.05□□□□□ -0.64
RAPGEF1-201ENST00000372189 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 MST1P26927 711 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 CCL20P78556 96 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 COLCA2A8K830 154 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 C1QL4Q86Z23 238 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 GAS1P54826 345 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
RAPGEF1-201ENST00000372189 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 TRBV6-7A0A0A0MS04 114 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 CCL1P22362 96 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 FOXA2Q9Y261 457 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 LY6G6EA0A0G2JKS1 128 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 U3KQA8 63 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 TCF20Q9UGU0 1960 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 WFDC1Q9HC57 220 aa11.03□□□□□ -0.64
RAPGEF1-201ENST00000372189 HIGD1CA8MV81 97 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 ORMDL3Q8N138 153 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 NAA38Q9BRA0 125 aaKnown RBP11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 NBR2O15453 112 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 GFI1Q99684 422 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 OSTCQ9NRP0 149 aa11.02□□□□□ -0.64
RAPGEF1-201ENST00000372189 TRAV24A0A0B4J272 114 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 A0A1B0GW64 132 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 H3BMM0 161 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 UBE2WQ96B02 151 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 GNB1LQ9BYB4 327 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 PEMTQ9UBM1 199 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 K7EP13 123 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 ERVK11-1P61568 191 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
RAPGEF1-201ENST00000372189 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms