RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 U3KQ87 197 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 MYLKQ15746 1914 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 NCOA1Q15788 1441 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 NUP98P52948 1817 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 FANCMQ8IYD8 2048 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 ZNF736B4DX44 427 aaPredicted RBP0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 INE1O15225 51 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 ZNF25P17030 456 aaPredicted RBP0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 SRIP30626 198 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 SPRNQ5BIV9 151 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 OR51A2Q8NGJ7 313 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 TRIM4Q9C037 500 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 UCK1Q9HA47 277 aa0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 NHP2Q9NX24 153 aaKnown RBP0.73□□□□□ -2.29
RNU6-560P-201ENST00000364007 CITO14578 2027 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 C7orf71A4D174 169 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 PDE6DO43924 150 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 SERPINE1P05121 402 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 C8GP07360 202 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 PPIBP23284 216 aaKnown RBP0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 RHOBP62745 196 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 OR52L1Q8NGH7 329 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 C2orf50Q96LR7 162 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 GLTPQ9NZD2 209 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 UNC13CQ8NB66 2214 aa0.72□□□□□ -2.29
RNU6-560P-201ENST00000364007 CYB5BO43169 146 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 CDKN2CP42773 168 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 SRSF6Q13247 344 aaKnown RBP0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 TMEM97Q5BJF2 176 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 SOSTDC1Q6X4U4 206 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 OR2T10Q8NGZ9 312 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 SLAMF6Q96DU3 332 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 C6orf62Q9GZU0 229 aaPredicted RBP0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 BCL2L10Q9HD36 194 aa0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 PHRF1Q9P1Y6 1649 aaKnown RBP0.71□□□□□ -2.3
RNU6-560P-201ENST00000364007 RTL1A6NKG5 1358 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 MYO3BQ8WXR4 1341 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 COL1A1P02452 1464 aaPredicted RBP0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 CLDN25C9JDP6 229 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 GADD45GO95257 159 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 RNASE4P34096 147 aaKnown RBP0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 HIST1H3AP68431 136 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 H3F3AP84243 136 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 RGS21Q2M5E4 152 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 MPV17LQ2QL34 196 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 Q6Q795 121 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 AMELYQ99218 206 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 TVP23BQ9NYZ1 205 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 FBXO5Q9UKT4 447 aa0.7□□□□□ -2.3
RNU6-560P-201ENST00000364007 ASCC3Q8N3C0 2202 aaKnown RBP0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 TMEM114B3SHH9 223 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 HAND1O96004 215 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 SERPINB9P50453 376 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 DYNLT1P63172 113 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 Q8IYB0 196 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 Q8N6K4 173 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 TEX47Q8TBZ9 253 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 FAM172AQ8WUF8 416 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 BORCS5Q969J3 196 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 PRADC1Q9BSG0 188 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 TMEM133Q9H2Q1 129 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 C14orf132Q9NPU4 83 aa0.69□□□□□ -2.3
RNU6-560P-201ENST00000364007 MYH2Q9UKX2 1941 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 DNAL4O96015 105 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 ANP32AP39687 249 aaKnown RBP0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 AP3S2P59780 193 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 SLC30A7Q8NEW0 376 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 PATE1Q8WXA2 126 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 MED12Q93074 2177 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 RNF122Q9H9V4 155 aa0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 N4BP2Q86UW6 1770 aaPredicted RBP0.68□□□□□ -2.3
RNU6-560P-201ENST00000364007 PCF11O94913 1555 aaKnown RBP0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 CCL25O15444 150 aa0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 STAG3L4Q8TBR4 150 aa0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 PRAP1Q96NZ9 151 aa0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 SIGMAR1Q99720 223 aa0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 TLNRD1Q9H1K6 362 aa0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 CHCHD2Q9Y6H1 151 aaPredicted RBP0.67□□□□□ -2.3
RNU6-560P-201ENST00000364007 TIMM17BO60830 172 aa0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 EIF5AP63241 154 aaKnown RBP0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 CCL7P80098 99 aa0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 C4orf3Q8WVX3 66 aa0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 SLC22A13Q9Y226 551 aa0.66□□□□□ -2.3
RNU6-560P-201ENST00000364007 TRAV4A0A0B4J268 109 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 TRBV6-4A0A1B0GX49 114 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 J3QRK9 145 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 NCR3O14931 201 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 CCL16O15467 120 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 ERP29P30040 261 aaKnown RBP0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 PIGPP57054 158 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 FAM74A1Q5RGS3 127 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 LYRM7Q5U5X0 104 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 SBSPONQ8IVN8 264 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 TMEM254Q8TBM7 123 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 ITFG2Q969R8 447 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 TAS2R7Q9NYW3 318 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.31
RNU6-560P-201ENST00000364007 OR7C1O76099 320 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms