RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 OR10K1Q8NGX5 313 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR10X1Q8NGY0 326 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR2T10Q8NGZ9 312 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 C15orf40Q8WUR7 153 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 PP6455Q8WZ26 134 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 NDFIP1Q9BT67 221 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 PLEKHA1Q9HB21 404 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 MED4Q9NPJ6 270 aa3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 AMMECR1Q9Y4X0 333 aaPredicted RBP3.43□□□□□ -1.86
RNU4-39P-201ENST00000362455 DNAH6Q9C0G6 4158 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 TRAV41A0A0B4J266 112 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 IZUMO1RA6ND01 250 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 LINC01619G3V211 115 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 SULT1C4O75897 302 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 BRI3O95415 125 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 IGHV3-11P01762 117 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 HLA-DRB1P01911 266 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 MT-ND4P03905 459 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 ISG15P05161 165 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 BLVRBP30043 206 aaPredicted RBP3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 KISS1Q15726 138 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 NTM-AS1Q6ZSK4 140 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 RPP25LQ8N5L8 163 aaKnown RBP3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR51A2Q8NGJ7 313 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 ISOC2Q96AB3 205 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 CAMK2N2Q96S95 79 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 SLIRPQ9GZT3 109 aaKnown RBP3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 NAA50Q9GZZ1 169 aaKnown RBP3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 FAM107BQ9H098 131 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 PARP11Q9NR21 331 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 GLS2Q9UI32 602 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 NUBP2Q9Y5Y2 271 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 SORL1Q92673 2214 aa3.42□□□□□ -1.86
RNU4-39P-201ENST00000362455 A0A0J9YXV3 536 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 TCRBV3S1A0A5B6 114 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 ANKRD65E5RJM6 399 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 DNASE2O00115 360 aaPredicted RBP3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 MPDU1O75352 247 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 MED6O75586 246 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 CDRT1O95170 752 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 LGALS1P09382 135 aaKnown RBP3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR8U9P0C7N5 309 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 CD37P11049 281 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 GZMHP20718 246 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 PFN2P35080 140 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 ACTBP60709 375 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 MMDQ15546 238 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 C5orf64Q2M2E5 130 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF691Q5VV52 312 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 TMEM244Q5VVB8 128 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 LPCAT4Q643R3 524 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 KDM4DQ6B0I6 523 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 GAPTQ8N292 157 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR10W1Q8NGF6 305 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 OR1L1Q8NH94 360 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 COQ8AQ8NI60 647 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 ARL11Q969Q4 196 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 PTX4Q96A99 478 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 CCDC124Q96CT7 223 aaKnown RBP3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 MRPL20Q9BYC9 149 aaKnown RBP3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 RHOFQ9HBH0 211 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 GNG8Q9UK08 70 aa3.41□□□□□ -1.86
RNU4-39P-201ENST00000362455 A0A0U1RQV1 116 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF701M0R085 212 aaPredicted RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 SDCBPO00560 298 aaPredicted RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 GNGT2O14610 69 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 GEMIN2O14893 280 aaKnown RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 SULT1B1O43704 296 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 ORC5O43913 435 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 DEDDO75618 318 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 NDUFA3O95167 84 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 TRBV12-3P01733 135 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 HBZP02008 142 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 CD7P09564 240 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 RAB5AP20339 215 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 PMCHP20382 165 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 SMUG1Q53HV7 270 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR4C12Q96R67 309 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 HSD17B10Q99714 261 aaKnown RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF251Q9BRH9 671 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 FAM103A1Q9BTL3 118 aaKnown RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 WFDC10AQ9H1F0 79 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF430Q9H8G1 570 aaPredicted RBP3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 WFDC1Q9HC57 220 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF355PQ9NSJ1 428 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 NACAE9PAV3 2078 aa3.4□□□□□ -1.87
RNU4-39P-201ENST00000362455 TRAV6A0A075B6T7 132 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 IGHV3OR16-9A0A0B4J2B5 98 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 TMEM30CPA0ZSE6 113 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 J3QLW9 94 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 YIF1AO95070 293 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 LY6G6CO95867 125 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 IFNA6P05013 189 aa3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 IGFBP3P17936 291 aaPredicted RBP3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 PPP1CCP36873 323 aaKnown RBP3.39□□□□□ -1.87
RNU4-39P-201ENST00000362455 KCNJ3P48549 501 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 450.7 ms