RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 PAX2Q02962 417 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 KIR3DS1Q14943 382 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 COQ2Q96H96 371 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 GOSR1O95249 250 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 MYOD1P15172 320 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 TMEM78Q5T7P6 136 aa13.16□□□□□ -0.3
CLSTN1-201ENST00000361311 ATP5LO75964 103 aa13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 TTC32Q5I0X7 151 aa13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 CADP27708 2225 aa13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 CENPVQ7Z7K6 275 aaPredicted RBP13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
CLSTN1-201ENST00000361311 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 FAM90A1Q86YD7 464 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 SLC25A48Q6ZT89 311 aaKnown RBP13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 NPPCP23582 126 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 FER1L6-AS1Q8NA97 138 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 YPEL4Q96NS1 127 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
CLSTN1-201ENST00000361311 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
CLSTN1-201ENST00000361311 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-201ENST00000361311 TM4SF5O14894 197 aa13.13□□□□□ -0.31
CLSTN1-201ENST00000361311 MFAP4P55083 255 aa13.13□□□□□ -0.31
CLSTN1-201ENST00000361311 LEPP41159 167 aa13.13□□□□□ -0.31
CLSTN1-201ENST00000361311 LMO1P25800 156 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 GLRXP35754 106 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 MLANAQ16655 118 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 SPACA3Q8IXA5 215 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 C1orf185Q5T7R7 199 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 PSG8Q9UQ74 426 aa13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 COL4A4P53420 1690 aaPredicted RBP13.12□□□□□ -0.31
CLSTN1-201ENST00000361311 C10orf55Q5SWW7 151 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 AHRRA9YTQ3 701 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 K7EN84 100 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 IGHV2-70DA0A0C4DH43 119 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 IGLC7A0M8Q6 106 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 GGTLC3B5MD39 225 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 APOMO95445 188 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 TCRAP04437 139 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 SP9P0CG40 484 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 GFRALQ6UXV0 394 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 RAB1BQ9H0U4 201 aa13.11□□□□□ -0.31
CLSTN1-201ENST00000361311 FRMPD3Q5JV73 1810 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 FAM169BQ8N8A8 192 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 IGHV3-35A0A0C4DH35 117 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 DPM2O94777 84 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 IL18BPO95998 194 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
CLSTN1-201ENST00000361311 D6R8Y8 96 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 C16orf97H3BN30 126 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 K7EP13 123 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 CCL3L1P16619 93 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 FXYD7P58549 80 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 CD177Q8N6Q3 437 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 FBXL15Q9H469 300 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 NDUFA3O95167 84 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 PRB4P10163 310 aaPredicted RBP13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 C11orf1Q9H5F2 150 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 S4R3C0 116 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 TRAV8-1A0A0A6YYK1 113 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 SRRM5B3KS81 715 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 SMIM27A0A1W2PRY6 76 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 VDAC2P45880 294 aaPredicted RBP13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
CLSTN1-201ENST00000361311 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.31
CLSTN1-201ENST00000361311 Q8NFD4 153 aa13.08□□□□□ -0.31
CLSTN1-201ENST00000361311 LINC00312Q9Y6C7 94 aa13.08□□□□□ -0.31
CLSTN1-201ENST00000361311 FNDC10F2Z333 226 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 ZNF71Q9NQZ8 489 aaPredicted RBP13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 CD24P25063 80 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 CKS1BP61024 79 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms