RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CD33P20138 364 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 EEF1AKMT3Q96AZ1 226 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 IGHV2-26A0A0B4J1V2 119 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 C9JCJ5 164 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 ID1P41134 155 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 ZNF672Q499Z4 452 aaPredicted RBP13.37□□□□□ -0.27
SCAF1-201ENST00000360565 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 WNT2P09544 360 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 DGAT2L7PQ6IED9 249 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 FAM169BQ8N8A8 192 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 CIARTQ8N365 385 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-201ENST00000360565 NUDT10Q8NFP7 164 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 NUDT11Q96G61 164 aa13.36□□□□□ -0.27
SCAF1-201ENST00000360565 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-201ENST00000360565 TNFSF13O75888 250 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 PFN1P07737 140 aaKnown RBP13.35□□□□□ -0.27
SCAF1-201ENST00000360565 ST6GALNAC3Q8NDV1 305 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 C18orf15Q96N68 181 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 RNASE2P10153 161 aaKnown RBP13.35□□□□□ -0.27
SCAF1-201ENST00000360565 TRBV20OR9-2A0A075B6H5 130 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 FBLL1A6NHQ2 334 aaKnown RBP13.35□□□□□ -0.27
SCAF1-201ENST00000360565 TRGV3P03979 118 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 PSG1P11464 419 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 DUX4L9Q6RFH8 374 aaPredicted RBP13.35□□□□□ -0.27
SCAF1-201ENST00000360565 TNFRSF14Q92956 283 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 MIEN1Q9BRT3 115 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 KIAA1549LQ6ZVL6 1849 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 ZNF502Q8TBZ5 544 aa13.35□□□□□ -0.27
SCAF1-201ENST00000360565 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 SNAI2O43623 268 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 GPX1P07203 203 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 HERVK_113P61574 105 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 CLEC19AQ6UXS0 136 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 PVRIGQ6DKI7 326 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 Q6ZSR3 168 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 C8orf46Q8TAG6 207 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 PMCHL2Q9BQD1 86 aa13.34□□□□□ -0.27
SCAF1-201ENST00000360565 PDLIM4P50479 330 aa13.33□□□□□ -0.27
SCAF1-201ENST00000360565 KLF17Q5JT82 389 aaPredicted RBP13.33□□□□□ -0.27
SCAF1-201ENST00000360565 NEUROG1Q92886 237 aa13.33□□□□□ -0.27
SCAF1-201ENST00000360565 RAB37Q96AX2 223 aa13.33□□□□□ -0.27
SCAF1-201ENST00000360565 CHODLQ9H9P2 273 aa13.33□□□□□ -0.27
SCAF1-201ENST00000360565 PSG8Q9UQ74 426 aa13.33□□□□□ -0.27
SCAF1-201ENST00000360565 NUDT3O95989 172 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 GCSHP23434 173 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 LINC00479Q96M42 142 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 PMS2P5A8MQ11 134 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 F11RQ9Y624 299 aaKnown RBP13.33□□□□□ -0.28
SCAF1-201ENST00000360565 TNCP24821 2201 aa13.33□□□□□ -0.28
SCAF1-201ENST00000360565 EXOC3-AS1Q8N2X6 119 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 SCRT1Q9BWW7 348 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
SCAF1-201ENST00000360565 LYPD6BQ8NI32 183 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 PLA2G2EQ9NZK7 142 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 C7orf71A4D174 169 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 LY6HO94772 140 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 CYB5R2Q6BCY4 276 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 PIEZO2Q9H5I5 2752 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 GZMBP10144 247 aa13.32□□□□□ -0.28
SCAF1-201ENST00000360565 ITGB1BP1O14713 200 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
SCAF1-201ENST00000360565 ZNF134P52741 427 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 FAM106AQ4KMX7 169 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 Q6AWC8 147 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 FER1L6-AS1Q8NA97 138 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 TMEM14BQ9NUH8 114 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
SCAF1-201ENST00000360565 ORMDL3Q8N138 153 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 M0R381 172 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 SIGLEC9Q9Y336 463 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 IGLV1-44P01699 117 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 KLRD1Q13241 179 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 LAMTOR2Q9Y2Q5 125 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 THBDP07204 575 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 OR10J3Q5JRS4 329 aa13.3□□□□□ -0.28
SCAF1-201ENST00000360565 A0A1B0GUS0 222 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 LINC00614P0C842 121 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 DYNLRB2Q8TF09 96 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 LY96Q9Y6Y9 160 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 ARHGAP21Q5T5U3 1957 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
SCAF1-201ENST00000360565 K7ERU9 68 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms