RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 MARC2Q969Z3 335 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 A0A1W2PPV4 95 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 TOMM40O96008 361 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 YPEL3P61236 119 aaPredicted RBP14.43□□□□□ -0.1
CLN3-206ENST00000360019 FAM78BQ5VT40 261 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 CLEC19AQ6UXS0 136 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 IL34Q6ZMJ4 242 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 USMG5Q96IX5 58 aa14.43□□□□□ -0.1
CLN3-206ENST00000360019 HBE1P02100 147 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 OR5G3P0C626 314 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 PLP1P60201 277 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 RHOBP62745 196 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 GATAD1Q8WUU5 269 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 ZNF414Q96IQ9 312 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 CITED4Q96RK1 184 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 DNAJC4Q9NNZ3 241 aa14.42□□□□□ -0.1
CLN3-206ENST00000360019 TMEM89A2RUT3 159 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 COX7A2P2O60397 106 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 FABP1P07148 127 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 ORM2P19652 201 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 MIR17HGQ75NE6 70 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 OR1B1Q8NGR6 318 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 UHRF2Q96PU4 802 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 C19orf24Q9BVV8 132 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 FUT9Q9Y231 359 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
CLN3-206ENST00000360019 STAG3L2P0CL84 134 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 STAG3L3P0CL85 134 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 RPL15P61313 204 aaKnown RBP14.41□□□□□ -0.1
CLN3-206ENST00000360019 SLC35B1P78383 322 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 MORN5Q5VZ52 161 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 OR51G1Q8NGK1 321 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 OR1L4Q8NGR5 311 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 ATP6V0BQ99437 205 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 PFDN5Q99471 154 aa14.41□□□□□ -0.1
CLN3-206ENST00000360019 GAR1Q9NY12 217 aaKnown RBP14.41□□□□□ -0.1
CLN3-206ENST00000360019 NUDT19A8MXV4 375 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 TGOLN2O43493 480 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 IGHV3-11P01762 117 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 LYZP61626 148 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 SRSF3P84103 164 aaKnown RBP14.4□□□□□ -0.1
CLN3-206ENST00000360019 KIAA0141Q14154 515 aaPredicted RBP14.4□□□□□ -0.1
CLN3-206ENST00000360019 C10orf113Q5VZT2 155 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 TEX38Q6PEX7 206 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 EIF4E3Q8N5X7 224 aaKnown RBP14.4□□□□□ -0.1
CLN3-206ENST00000360019 ZNF491Q8N8L2 437 aa14.4□□□□□ -0.1
CLN3-206ENST00000360019 ELOA3CA0A087WX78 387 aaPredicted RBP14.39□□□□□ -0.11
CLN3-206ENST00000360019 RAB19A4D1S5 217 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 CRLF1O75462 422 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 SCGB2A1O75556 95 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 OR2C1O95371 312 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 COMMD1Q8N668 190 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 FAM210AQ96ND0 272 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 JMJD8Q96S16 334 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 SCRT1Q9BWW7 348 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 TMPRSS5Q9H3S3 457 aa14.39□□□□□ -0.11
CLN3-206ENST00000360019 SETD2Q9BYW2 2564 aaPredicted RBP14.39□□□□□ -0.11
CLN3-206ENST00000360019 A0A0G2JLM5 398 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 WI2-2373I1.2A0A1W2PRP0 233 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 PPP5D1E7EU14 171 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 HYPMO75409 117 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 TRBV12-3P01733 135 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 IL4P05112 153 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 RPLP1P05386 114 aaKnown RBP14.38□□□□□ -0.11
CLN3-206ENST00000360019 CRYBA1P05813 215 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 ELANEP08246 267 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 FOXE3Q13461 319 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 LINC00305Q7Z4B0 112 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 Q8WTZ3 238 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 RNF125Q96EQ8 232 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 PBDC1Q9BVG4 233 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 MRPL32Q9BYC8 188 aaKnown RBP14.38□□□□□ -0.11
CLN3-206ENST00000360019 NIPBLQ6KC79 2804 aaeCLIP14.38□□□□□ -0.11
CLN3-206ENST00000360019 IGHV3-35A0A0C4DH35 117 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 ARL14EPLP0DKL9 152 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 ZNF343Q6P1L6 599 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 RNF152Q8N8N0 203 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 MYOZ3Q8TDC0 251 aa14.38□□□□□ -0.11
CLN3-206ENST00000360019 MRPL27Q9P0M9 148 aaKnown RBP14.38□□□□□ -0.11
CLN3-206ENST00000360019 PUS1Q9Y606 427 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLN3-206ENST00000360019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.37□□□□□ -0.11
CLN3-206ENST00000360019 TRAV5A0A0B4J249 113 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 USF2Q15853 346 aaPredicted RBP14.37□□□□□ -0.11
CLN3-206ENST00000360019 ZNF600Q6ZNG1 722 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 OR4X2Q8NGF9 303 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 RNF2Q99496 336 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 TMEM231Q9H6L2 316 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 GNB4Q9HAV0 340 aa14.37□□□□□ -0.11
CLN3-206ENST00000360019 GUK1Q16774 197 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 TOR2AQ5JU69 321 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 KLHDC1Q8N7A1 406 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 ZNF503Q96F45 646 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 FAM167A-AS1Q96KT0 104 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 SLC25A2Q9BXI2 301 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 HIGD1AQ9Y241 93 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 CXorf1O96002 111 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 C8orf88P0DMB2 117 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 ARL3P36405 182 aa14.36□□□□□ -0.11
CLN3-206ENST00000360019 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms