RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 LINC00271P0C7V0 271 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 IFITM1P13164 125 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 SSPNQ14714 243 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 SMIM20Q8N5G0 67 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 PHF7Q9BWX1 381 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-203ENST00000358544 RNF7Q9UBF6 113 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 DRD3P35462 400 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 C1orf122Q6ZSJ8 110 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 CFHR5Q9BXR6 569 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 SIP14410 1827 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 LYZL6O75951 148 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 A0A0J9YW62 118 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 NBEAP1P0C6P0 100 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 YAE1D1Q9NRH1 226 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 YPEL1O60688 119 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 QRFPP83859 136 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 LPAL2Q16609 132 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 TMEM14EPQ6UXP3 125 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 YPEL2Q96QA6 119 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 FAM53AQ6NSI3 398 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF319Q9P2F9 582 aa5.08□□□□□ -1.6
VPS13B-203ENST00000358544 TRAV12-3A0A0B4J271 114 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 C1QTNF4Q9BXJ3 329 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 CHTOPQ9Y3Y2 248 aaKnown RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF106Q9H2Y7 1883 aaKnown RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 TMEM155Q4W5P6 130 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 J3QW42 95 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ZIC3O60481 467 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 CT83Q5H943 113 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 TMEM54Q969K7 222 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ITPR3Q14573 2671 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 MLNRO43193 412 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF826PQ6ZT77 177 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 PHLDA3Q9Y5J5 127 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 LILRA6Q6PI73 481 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 GTSCR1Q86UQ5 136 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 UBALD2Q8IYN6 164 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 SPAG8Q99932 426 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 MCRIP2Q9BUT9 160 aaKnown RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 C11orf68Q9H3H3 251 aaKnown RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ANAPC10Q9UM13 185 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 RNASE1P07998 156 aaKnown RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 IGLL1P15814 213 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 EFNB3Q15768 340 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ARPC1AQ92747 370 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 MORN3Q6PF18 240 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-203ENST00000358544 RPRMLQ8N4K4 120 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 LYPD6BQ8NI32 183 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 METTL26Q96S19 204 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 RBX1P62877 108 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 POU2AF1Q16633 256 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 FAM90A9PA6NNJ1 464 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 SMIM10L1P0DMW3 83 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 SMIM10Q96HG1 83 aa5.07□□□□□ -1.6
VPS13B-203ENST00000358544 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.06□□□□□ -1.6
VPS13B-203ENST00000358544 SAP30O75446 220 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 C2orf82Q6UX34 121 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
VPS13B-203ENST00000358544 C1RLQ9NZP8 487 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 LTBP4Q8N2S1 1624 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 WDR82Q6UXN9 313 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV1D-43A0A0B4J1Z2 117 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 TMPRSS2O15393 492 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 NKX2-8O15522 239 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 COX8AP10176 69 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 SRFP11831 508 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 K7ERJ3 54 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 CCL13Q99616 98 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 TREML4Q6UXN2 200 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 DEFB125Q8N687 156 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 CCL17Q92583 94 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 SRSF7Q16629 238 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS13B-203ENST00000358544 HAPLN4Q86UW8 402 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 PIMREGQ9BSJ6 248 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 PAPPAQ13219 1627 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ATG2AQ2TAZ0 1938 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 IGHV3-72A0A0B4J1Y9 119 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 NPIPB11E5RHQ5 1161 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 FCN3O75636 299 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF56Q15929 161 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 CSRP2Q16527 193 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 NXPH1P58417 271 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 B5MCH6 92 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ZNHIT1O43257 154 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 PYYP10082 97 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 WBP1Q96G27 269 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 ASIPP42127 132 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 PDLIM4P50479 330 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 LAGE3Q14657 143 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 OR13A1Q8NGR1 328 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 NPFFR1Q9GZQ6 430 aa5.06□□□□□ -1.6
VPS13B-203ENST00000358544 LSM4Q9Y4Z0 139 aaKnown RBP5.06□□□□□ -1.6
VPS13B-203ENST00000358544 IGHV3-48P01763 117 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms