RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PRB2P02812 416 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 C4BPBP20851 252 aa13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 KRTAP10-11P60412 298 aa13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 Q8WTZ3 238 aa13.55□□□□□ -0.24
PDLIM7-202ENST00000355841 LINC00862A6NCI5 91 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 TOMM40O96008 361 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 APOHP02749 345 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 IL4P05112 153 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 LYL1P12980 280 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 S100A11P31949 105 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 HBG1P69891 147 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 HBG2P69892 147 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 BEAN1Q3B7T3 259 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 TEX261Q6UWH6 196 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 OR5C1Q8NGR4 320 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 TRGV9Q99603 122 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 NPVFQ9HCQ7 196 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 MLXQ9UH92 298 aa13.54□□□□□ -0.24
PDLIM7-202ENST00000355841 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 G3V3Q6 166 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 INSL3P51460 131 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 CLINT1Q14677 625 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 BTNL8Q6UX41 500 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 OR51G1Q8NGK1 321 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 DYNLRB2Q8TF09 96 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 ASB13Q8WXK3 278 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 UQCC1Q9NVA1 299 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 IZUMO1RA6ND01 250 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 K7EMT4 169 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 WIPF1O43516 503 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 IFNA7P01567 189 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 ELLP55199 621 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 FGL1Q08830 312 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 TEPPQ6URK8 271 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 ZNF680Q8NEM1 530 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 OR11H4Q8NGC9 324 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 PBDC1Q9BVG4 233 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 SMIM3Q9BZL3 60 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
PDLIM7-202ENST00000355841 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 FNDC10F2Z333 226 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 C8orf88P0DMB2 117 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 DEFB114Q30KQ6 69 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 GINS3Q9BRX5 216 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-202ENST00000355841 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 LYZP61626 148 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 BAXQ07812 192 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 CYP2G1PQ6ZSU1 146 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 RNF125Q96EQ8 232 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 MGST2Q99735 147 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 RHPN1-AS1Q9BWJ2 59 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
PDLIM7-202ENST00000355841 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 NPPCP23582 126 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 KPRPQ5T749 579 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 MARC2Q969Z3 335 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 METTL26Q96S19 204 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 MEGF8Q7Z7M0 2845 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 DNAH3Q8TD57 4116 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 CHEK1O14757 476 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 AGPAT2O15120 278 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 FABP1P07148 127 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 LGALSLQ3ZCW2 172 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 RNF2Q99496 336 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 WDR83OSQ9Y284 106 aa13.5□□□□□ -0.25
PDLIM7-202ENST00000355841 FBN3Q75N90 2809 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 CLLU1Q5K131 121 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 CITED4Q96RK1 184 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 PRR25Q96S07 402 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 DOK5Q9P104 306 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 UBQLN2Q9UHD9 624 aa13.49□□□□□ -0.25
PDLIM7-202ENST00000355841 ORM2P19652 201 aa13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 FGF7P21781 194 aa13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 CRYBB3P26998 211 aa13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 WFDC1Q9HC57 220 aa13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-202ENST00000355841 LINC00869P0C866 280 aa13.47□□□□□ -0.25
PDLIM7-202ENST00000355841 CAMLGP49069 296 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms