RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 UNC13CQ8NB66 2214 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 C9orf172C9J069 976 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 GFRA3O60609 400 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 LILRA1O75019 489 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 APOBEC3AP31941 199 aaPredicted RBP10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 ALPK2Q86TB3 2170 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 COL4A1P02462 1669 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 FNDC10F2Z333 226 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 A0A1W2PR77 199 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 TRGV9Q99603 122 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 CITED1Q99966 193 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 K7EP34 96 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 LY6EQ16553 131 aa10.5□□□□□ -0.73
SYNCRIP-201ENST00000355238 ARID2Q68CP9 1835 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 PRR7Q8TB68 274 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGHV1-2P23083 117 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 HIST1H4AP62805 103 aaKnown RBP10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 TMEM42Q69YG0 159 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 FOXF2Q12947 444 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 KLF2Q9Y5W3 355 aaPredicted RBP10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 OVOL1O14753 267 aa10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGKV1-27A0A075B6S5 117 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 TOMM40O96008 361 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 TMEM86BQ8N661 226 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGKV3D-20A0A0C4DH25 116 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 Q6ZWC4 215 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 C9JAW5 83 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 CELA3AP09093 270 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 NTF4P34130 210 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 LYPD1Q8N2G4 141 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 ASCL4Q6XD76 172 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 TMEM158Q8WZ71 300 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGHV3OR16-8A0A075B7F1 116 aa10.48□□□□□ -0.73
SYNCRIP-201ENST00000355238 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGLV3-12A0A075B6K2 115 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 CDKN1BP46527 198 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 TMEM133Q9H2Q1 129 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 CACNA1IQ9P0X4 2223 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGHV2-26A0A0B4J1V2 119 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 CCL3L1P16619 93 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 PMS2P5A8MQ11 134 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 CELA3BP08861 270 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 PHLDA1Q8WV24 401 aaPredicted RBP10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 TNFRSF14Q92956 283 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 IMMP1LQ96LU5 166 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 TPRP12270 2363 aaKnown RBP10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 ZIC4Q8N9L1 334 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 SCN2AQ99250 2005 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 MTCL1Q9Y4B5 1905 aaKnown RBP10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 EXOC3-AS1Q8N2X6 119 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 LINC01587Q99440 93 aa10.47□□□□□ -0.73
SYNCRIP-201ENST00000355238 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 ZNF138P52744 262 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 FLVCR1-AS1Q8TAF5 88 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 NABP1Q96AH0 204 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 CHD5Q8TDI0 1954 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 C17orf100A8MU93 164 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 SH2D1AO60880 128 aa10.46□□□□□ -0.73
SYNCRIP-201ENST00000355238 A0A1B0GUS0 222 aa10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 CRPP02741 224 aa10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 SLAQ13239 276 aa10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 ZNF329Q86UD4 541 aa10.46□□□□□ -0.74
SYNCRIP-201ENST00000355238 CT83Q5H943 113 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 SPAARA0A1B0GVQ0 90 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 COX8AP10176 69 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 FXYD7P58549 80 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 STPG4Q8N801 248 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 KIF26BQ2KJY2 2108 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 GAGE12HA6NDE8 117 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 VCYO14598 125 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 C1orf122Q6ZSJ8 110 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 LIME1Q9H400 295 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 DOCK4Q8N1I0 1966 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 MYOD1P15172 320 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 PDLIM4P50479 330 aa10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 RPUSD1Q9UJJ7 312 aaKnown RBP10.45□□□□□ -0.74
SYNCRIP-201ENST00000355238 H3BMM0 161 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms