RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
SVIP-201ENST00000354193 HAX1O00165 279 aa8.83□□□□□ -1
SVIP-201ENST00000354193 CORTO00230 105 aa8.83□□□□□ -1
SVIP-201ENST00000354193 TSPAN9O75954 239 aa8.83□□□□□ -1
SVIP-201ENST00000354193 CLEC3BP05452 202 aa8.83□□□□□ -1
SVIP-201ENST00000354193 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
SVIP-201ENST00000354193 SELENOTP62341 195 aa8.83□□□□□ -1
SVIP-201ENST00000354193 LY6G5BQ8NDX9 201 aa8.83□□□□□ -1
SVIP-201ENST00000354193 SCRT1Q9BWW7 348 aa8.83□□□□□ -1
SVIP-201ENST00000354193 OR51M1Q9H341 326 aa8.83□□□□□ -1
SVIP-201ENST00000354193 GNG4P50150 75 aa8.82□□□□□ -1
SVIP-201ENST00000354193 BLCAPP62952 87 aa8.82□□□□□ -1
SVIP-201ENST00000354193 PRR31Q5SQ13 230 aa8.82□□□□□ -1
SVIP-201ENST00000354193 MORN5Q5VZ52 161 aa8.82□□□□□ -1
SVIP-201ENST00000354193 WFDC3Q8IUB2 231 aa8.82□□□□□ -1
SVIP-201ENST00000354193 BCL6BQ8N143 479 aaPredicted RBP8.82□□□□□ -1
SVIP-201ENST00000354193 LINC00479Q96M42 142 aa8.82□□□□□ -1
SVIP-201ENST00000354193 HSPB9Q9BQS6 159 aa8.82□□□□□ -1
SVIP-201ENST00000354193 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
SVIP-201ENST00000354193 F8P00451 2351 aa8.82□□□□□ -1
SVIP-201ENST00000354193 A0A1B0GW64 132 aa8.82□□□□□ -1
SVIP-201ENST00000354193 TCRBV4S1A1TA0A5B7 111 aa8.82□□□□□ -1
SVIP-201ENST00000354193 HELTA6NFD8 242 aa8.82□□□□□ -1
SVIP-201ENST00000354193 PQLC2Q6ZP29 291 aa8.82□□□□□ -1
SVIP-201ENST00000354193 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
SVIP-201ENST00000354193 SIRPDQ9H106 197 aa8.82□□□□□ -1
SVIP-201ENST00000354193 KLF2Q9Y5W3 355 aaPredicted RBP8.82□□□□□ -1
SVIP-201ENST00000354193 CLN5O75503 358 aa8.82□□□□□ -1
SVIP-201ENST00000354193 NDUFB8O95169 186 aa8.82□□□□□ -1
SVIP-201ENST00000354193 CRYBA1P05813 215 aa8.82□□□□□ -1
SVIP-201ENST00000354193 OR5I1Q13606 314 aa8.82□□□□□ -1
SVIP-201ENST00000354193 IGFL4Q6B9Z1 124 aa8.82□□□□□ -1
SVIP-201ENST00000354193 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
SVIP-201ENST00000354193 OR4F17Q8NGA8 305 aa8.82□□□□□ -1
SVIP-201ENST00000354193 MBD3L1Q8WWY6 194 aa8.82□□□□□ -1
SVIP-201ENST00000354193 TFPI2P48307 235 aa8.82□□□□□ -1
SVIP-201ENST00000354193 A0A087X0M5 115 aa8.81□□□□□ -1
SVIP-201ENST00000354193 A0A1B0GX30 115 aa8.81□□□□□ -1
SVIP-201ENST00000354193 ZNF137PP52743 207 aa8.81□□□□□ -1
SVIP-201ENST00000354193 CD81P60033 236 aa8.81□□□□□ -1
SVIP-201ENST00000354193 ZNF562Q6V9R5 426 aa8.81□□□□□ -1
SVIP-201ENST00000354193 NAT8Q9UHE5 227 aa8.81□□□□□ -1
SVIP-201ENST00000354193 CNN1P51911 297 aaKnown RBP8.81□□□□□ -1
SVIP-201ENST00000354193 RPL15P61313 204 aaKnown RBP8.81□□□□□ -1
SVIP-201ENST00000354193 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
SVIP-201ENST00000354193 MFAP2P55001 183 aa8.81□□□□□ -1
SVIP-201ENST00000354193 C8orf46Q8TAG6 207 aa8.81□□□□□ -1
SVIP-201ENST00000354193 CLDN34H7C241 214 aa8.81□□□□□ -1
SVIP-201ENST00000354193 DNASE2O00115 360 aaPredicted RBP8.81□□□□□ -1
SVIP-201ENST00000354193 IGHV4-59P01825 116 aa8.81□□□□□ -1
SVIP-201ENST00000354193 NBEAP1P0C6P0 100 aa8.81□□□□□ -1
SVIP-201ENST00000354193 STAG3L2P0CL84 134 aa8.81□□□□□ -1
SVIP-201ENST00000354193 STAG3L3P0CL85 134 aa8.81□□□□□ -1
SVIP-201ENST00000354193 GPX4P36969 197 aaPredicted RBP8.81□□□□□ -1
SVIP-201ENST00000354193 YAE1D1Q9NRH1 226 aa8.81□□□□□ -1
SVIP-201ENST00000354193 PITPNC1Q9UKF7 332 aa8.81□□□□□ -1
SVIP-201ENST00000354193 YTHDF2Q9Y5A9 579 aaKnown RBP8.81□□□□□ -1
SVIP-201ENST00000354193 NDUFS8O00217 210 aa8.8□□□□□ -1
SVIP-201ENST00000354193 NDUFA6P56556 154 aa8.8□□□□□ -1
SVIP-201ENST00000354193 SPOCK3Q9BQ16 436 aa8.8□□□□□ -1
SVIP-201ENST00000354193 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
SVIP-201ENST00000354193 TGIF2-C20orf24A0A0A6YYL0 155 aa8.8□□□□□ -1
SVIP-201ENST00000354193 OVOL3O00110 214 aa8.8□□□□□ -1
SVIP-201ENST00000354193 HIST2H2BDQ6DRA6 164 aa8.8□□□□□ -1
SVIP-201ENST00000354193 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
SVIP-201ENST00000354193 SLC17A3O00476 420 aa8.8□□□□□ -1
SVIP-201ENST00000354193 LINC01356Q8N9X3 169 aa8.8□□□□□ -1
SVIP-201ENST00000354193 PPP5D1E7EU14 171 aa8.79□□□□□ -1
SVIP-201ENST00000354193 AVPP01185 164 aa8.79□□□□□ -1
SVIP-201ENST00000354193 GALR1P47211 349 aa8.79□□□□□ -1
SVIP-201ENST00000354193 BAGE2Q86Y30 109 aa8.79□□□□□ -1
SVIP-201ENST00000354193 WFDC11Q8NEX6 87 aa8.79□□□□□ -1
SVIP-201ENST00000354193 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
SVIP-201ENST00000354193 EXOC3-AS1Q8N2X6 119 aa8.79□□□□□ -1
SVIP-201ENST00000354193 BIN3Q9NQY0 253 aa8.79□□□□□ -1
SVIP-201ENST00000354193 SRD5A1P18405 259 aa8.79□□□□□ -1
SVIP-201ENST00000354193 MAS1LP35410 378 aa8.79□□□□□ -1
SVIP-201ENST00000354193 RNF125Q96EQ8 232 aa8.79□□□□□ -1
SVIP-201ENST00000354193 CLEC5AQ9NY25 188 aa8.79□□□□□ -1
SVIP-201ENST00000354193 TBL2Q9Y4P3 447 aaKnown RBP8.79□□□□□ -1
SVIP-201ENST00000354193 TRAV8-1A0A0A6YYK1 113 aa8.79□□□□□ -1
SVIP-201ENST00000354193 DEFB113Q30KQ7 82 aa8.79□□□□□ -1
SVIP-201ENST00000354193 GOLT1AQ6ZVE7 132 aa8.79□□□□□ -1
SVIP-201ENST00000354193 PRNTQ86SH4 94 aa8.79□□□□□ -1
SVIP-201ENST00000354193 C15orf54Q8N8G6 183 aa8.79□□□□□ -1
SVIP-201ENST00000354193 C8orf31Q8N9H6 132 aa8.79□□□□□ -1
SVIP-201ENST00000354193 ATRQ13535 2644 aa8.78□□□□□ -1
SVIP-201ENST00000354193 IGHV7-81A0A0B4J1V7 117 aa8.78□□□□□ -1
SVIP-201ENST00000354193 ZNF705GA8MUZ8 300 aaPredicted RBP8.78□□□□□ -1
SVIP-201ENST00000354193 PDE6DO43924 150 aa8.78□□□□□ -1
SVIP-201ENST00000354193 SLC25A16P16260 332 aa8.78□□□□□ -1
SVIP-201ENST00000354193 TMEM249Q2WGJ8 235 aa8.78□□□□□ -1
SVIP-201ENST00000354193 ELOVL1Q9BW60 279 aa8.78□□□□□ -1
SVIP-201ENST00000354193 MOB4Q9Y3A3 225 aa8.78□□□□□ -1
SVIP-201ENST00000354193 TRAV41A0A0B4J266 112 aa8.78□□□□□ -1
SVIP-201ENST00000354193 S100A2P29034 98 aa8.78□□□□□ -1
SVIP-201ENST00000354193 ATP5G2Q06055 141 aa8.78□□□□□ -1
SVIP-201ENST00000354193 SRSF1Q07955 248 aaKnown RBP eCLIP8.78□□□□□ -1
SVIP-201ENST00000354193 CENPWQ5EE01 88 aa8.78□□□□□ -1
SVIP-201ENST00000354193 BPIFA4PQ86YQ2 179 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms