RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SRIP30626 198 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 ZNF134P52741 427 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 SEPSECSQ9HD40 501 aaKnown RBP11.13□□□□□ -0.63
SMC6-201ENST00000351948 PTPRSQ13332 1948 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 PMS2P5A8MQ11 134 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 SAPCD1Q5SSQ6 148 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
SMC6-201ENST00000351948 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
SMC6-201ENST00000351948 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 VENTXO95231 258 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 PPIFP30405 207 aaKnown RBP11.13□□□□□ -0.63
SMC6-201ENST00000351948 C3orf36Q3SXR2 165 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 WIPF3A6NGB9 483 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 HTN3P15516 51 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 G3V318 75 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 Q6ZS49 121 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 GPR82Q96P67 336 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 DUX3Q96PT4 197 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 MGST2Q99735 147 aa11.12□□□□□ -0.63
SMC6-201ENST00000351948 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 C22orf46C9J442 243 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 NDUFS8O00217 210 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 NUTF2P61970 127 aaKnown RBP11.11□□□□□ -0.63
SMC6-201ENST00000351948 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 ATRAIDQ6UW56 229 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 A0A1W2PPI3 338 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 OOSP1A8MZH6 123 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 LINC01587Q99440 93 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
SMC6-201ENST00000351948 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 CBY3A6NI87 242 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 C15orf62A8K5M9 175 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 CCKARP32238 428 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 C11orf53Q8IXP5 236 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 RPP25LQ8N5L8 163 aaKnown RBP11.1□□□□□ -0.63
SMC6-201ENST00000351948 F11RQ9Y624 299 aaKnown RBP11.1□□□□□ -0.63
SMC6-201ENST00000351948 SAP30O75446 220 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 UBE2E1P51965 193 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 IFT22Q9H7X7 185 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 A0A1B0GWJ7 208 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 CFHR2P36980 270 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 TMEM183BQ1AE95 376 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
SMC6-201ENST00000351948 TBL2Q9Y4P3 447 aaKnown RBP11.1□□□□□ -0.63
SMC6-201ENST00000351948 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
SMC6-201ENST00000351948 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
SMC6-201ENST00000351948 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 CA1P00915 261 aaPredicted RBP11.09□□□□□ -0.63
SMC6-201ENST00000351948 TEX36Q5VZQ5 186 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 ASCL2Q99929 193 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
SMC6-201ENST00000351948 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.63
SMC6-201ENST00000351948 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.63
SMC6-201ENST00000351948 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.63
SMC6-201ENST00000351948 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.64
SMC6-201ENST00000351948 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.64
SMC6-201ENST00000351948 MT-ND6P03923 174 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
SMC6-201ENST00000351948 RPS20P60866 119 aaKnown RBP11.08□□□□□ -0.64
SMC6-201ENST00000351948 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 CFPP27918 469 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 NUDT3O95989 172 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 ZFYVE26Q68DK2 2539 aa11.08□□□□□ -0.64
SMC6-201ENST00000351948 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 STHQ8IWL8 128 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 SLC25A39Q9BZJ4 359 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms