RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SRSF8Q9BRL6 282 aaKnown RBP14.77□□□□□ -0.05
HOXA9-201ENST00000343483 WNT10AQ9GZT5 417 aa14.77□□□□□ -0.05
HOXA9-201ENST00000343483 IGHV4-61A0A0C4DH41 118 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 PSMB11A5LHX3 300 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 C9JCJ5 164 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 FABP1P07148 127 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 TMEM11P17152 192 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 SAA4P35542 130 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 ACTL10Q5JWF8 245 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 TEX38Q6PEX7 206 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 CLEC2AQ6UVW9 174 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 TMEM116Q8NCL8 245 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 OR10G8Q8NGN5 311 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 C10orf105Q8TEF2 133 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 RNF2Q99496 336 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 ABCA12Q86UK0 2595 aa14.76□□□□□ -0.05
HOXA9-201ENST00000343483 FOXL1Q12952 345 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 MORN5Q5VZ52 161 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 C10orf113Q5VZT2 155 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 SGMS2Q8NHU3 365 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 PFDN5Q99471 154 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 GSN-AS1Q9NRJ2 163 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 WNK2Q9Y3S1 2297 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 TRAV5A0A0B4J249 113 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 A0A0U1RQK1 487 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 ZNF320A2RRD8 509 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 K7EN84 100 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 FABP4P15090 132 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 CRYBB3P26998 211 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 BPIFB3P59826 476 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 PYY3Q5JQD4 70 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 Q8N6K4 173 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 OR1L4Q8NGR5 311 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 BTF3L4Q96K17 158 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 OR51M1Q9H341 326 aa14.75□□□□□ -0.05
HOXA9-201ENST00000343483 PERPQ96FX8 193 aa14.74□□□□□ -0.05
HOXA9-201ENST00000343483 SLC25A2Q9BXI2 301 aa14.74□□□□□ -0.05
HOXA9-201ENST00000343483 LY96Q9Y6Y9 160 aa14.74□□□□□ -0.05
HOXA9-201ENST00000343483 APCP25054 2843 aa14.74□□□□□ -0.05
HOXA9-201ENST00000343483 FAM106CPP0CH98 169 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 CX3CL1P78423 397 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 EBI3Q14213 229 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 TMEM183AQ8IXX5 376 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 FAM167A-AS1Q96KT0 104 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 TRGV9Q99603 122 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 GSX1Q9H4S2 264 aaPredicted RBP14.73□□□□□ -0.05
HOXA9-201ENST00000343483 XKRY2A2RUG3 117 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 HELTA6NFD8 242 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 GGTLC3B5MD39 225 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 NDUFS8O00217 210 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 ORM2P19652 201 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 FAM120AOSQ5T036 256 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 PATE2Q6UY27 113 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 OR5AU1Q8NGC0 362 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 NRGNQ92686 78 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 ARPC1AQ92747 370 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 AJUBAQ96IF1 538 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 ZNF355PQ9NSJ1 428 aa14.73□□□□□ -0.05
HOXA9-201ENST00000343483 A0A1W2PRE2 83 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 I3L2K1 104 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 NPFFO15130 113 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 GNG4P50150 75 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 UBE2L3P68036 154 aaKnown RBP14.72□□□□□ -0.05
HOXA9-201ENST00000343483 CENPWQ5EE01 88 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 ZNF562Q6V9R5 426 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 OR1B1Q8NGR6 318 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 POLR3KQ9Y2Y1 108 aaPredicted RBP14.72□□□□□ -0.05
HOXA9-201ENST00000343483 IGHV4-30-2A0A087WSY4 118 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 SUMO1P63165 101 aaKnown RBP14.72□□□□□ -0.05
HOXA9-201ENST00000343483 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
HOXA9-201ENST00000343483 CENPVL3A0A0U1RRI6 287 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 VWC2LB2RUY7 222 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 BRS3P32247 399 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 NDPQ00604 133 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 KLF17Q5JT82 389 aaPredicted RBP14.71□□□□□ -0.05
HOXA9-201ENST00000343483 LINC00305Q7Z4B0 112 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 HIST1H2BLQ99880 126 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 TRAPPC1Q9Y5R8 145 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 VPS13CQ709C8 3753 aa14.71□□□□□ -0.05
HOXA9-201ENST00000343483 IGHV3OR16-10A0A075B7F0 116 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 RPL15P61313 204 aaKnown RBP14.7□□□□□ -0.06
HOXA9-201ENST00000343483 PACRGQ96M98 296 aaPredicted RBP14.7□□□□□ -0.06
HOXA9-201ENST00000343483 POLQO75417 2590 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 SLC17A3O00476 420 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 PAX8Q06710 450 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 OR5I1Q13606 314 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 COA6Q5JTJ3 125 aaKnown RBP14.7□□□□□ -0.06
HOXA9-201ENST00000343483 IL36BQ9NZH7 164 aa14.7□□□□□ -0.06
HOXA9-201ENST00000343483 K7EIM0 57 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 IGLC1P0CG04 106 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 PYYP10082 97 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 COX6B1P14854 86 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 ERVFC1-1P60608 527 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 OR1L6Q8NGR2 347 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 PAXXQ9BUH6 204 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 C1RLQ9NZP8 487 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 NOTCH2Q04721 2471 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 ASPHD1Q5U4P2 390 aa14.69□□□□□ -0.06
HOXA9-201ENST00000343483 RBM14Q96PK6 669 aaKnown RBP14.69□□□□□ -0.06
HOXA9-201ENST00000343483 RASL11BQ9BPW5 248 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms