RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 C1QTNF4Q9BXJ3 329 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 WDR12Q9GZL7 423 aaKnown RBP11.69□□□□□ -0.54
H3F3C-201ENST00000340398 MUC4Q99102 2169 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 CRYM-AS1A6NIL9 109 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 P0DMU3 169 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
H3F3C-201ENST00000340398 LINC00052Q96N35 136 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 SEPSECSQ9HD40 501 aaKnown RBP11.68□□□□□ -0.54
H3F3C-201ENST00000340398 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
H3F3C-201ENST00000340398 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 IFNA10P01566 189 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 NKX2-1P43699 371 aaPredicted RBP11.67□□□□□ -0.54
H3F3C-201ENST00000340398 ZNF90Q03938 601 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 C15orf40Q8WUR7 153 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 PCLOQ9Y6V0 5065 aa11.67□□□□□ -0.54
H3F3C-201ENST00000340398 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
H3F3C-201ENST00000340398 DISC1C4P0D8 188 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 RGS5O15539 181 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
H3F3C-201ENST00000340398 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
H3F3C-201ENST00000340398 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
H3F3C-201ENST00000340398 OR51S1Q8NGJ8 323 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 NEU1Q99519 415 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 RBKSQ9H477 322 aa11.66□□□□□ -0.54
H3F3C-201ENST00000340398 IGLV2-18A0A075B6J9 118 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 IGKV1D-37A0A075B6S9 117 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 GSTZ1O43708 216 aaPredicted RBP11.65□□□□□ -0.54
H3F3C-201ENST00000340398 AKAIN1P0CW23 69 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 SMIM18P0DKX4 95 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 SSBP1Q04837 148 aaKnown RBP11.65□□□□□ -0.54
H3F3C-201ENST00000340398 GAMTQ14353 236 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
H3F3C-201ENST00000340398 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 NOXA1Q86UR1 476 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 SLC35B3Q9H1N7 401 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
H3F3C-201ENST00000340398 U3KQ87 197 aa11.65□□□□□ -0.54
H3F3C-201ENST00000340398 F6UB75 175 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 LGI3Q8N145 548 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 ZNF709Q8N972 641 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 SMIM4Q8WVI0 70 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 DKK2Q9UBU2 259 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
H3F3C-201ENST00000340398 SMIM9A6NGZ8 99 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 ZFP92A6NM28 416 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 MED14OSP0DP75 135 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 HTN3P15516 51 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 OR2F1Q13607 317 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 SPCS2Q15005 226 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 LGALS9BQ3B8N2 356 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 FAM222AQ5U5X8 452 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 CLVS1Q8IUQ0 354 aaPredicted RBP11.63□□□□□ -0.55
H3F3C-201ENST00000340398 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
H3F3C-201ENST00000340398 SOCS3O14543 225 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 IFNA21P01568 189 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 AKR1C4P17516 323 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 ID1P41134 155 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 CCR6P51684 374 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 LYZP61626 148 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 SUPT4H1P63272 117 aaKnown RBP11.62□□□□□ -0.55
H3F3C-201ENST00000340398 MRPS10P82664 201 aaKnown RBP11.62□□□□□ -0.55
H3F3C-201ENST00000340398 IL18Q14116 193 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 FOXI2Q6ZQN5 318 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 RYR1P21817 5038 aa11.62□□□□□ -0.55
H3F3C-201ENST00000340398 TMEM189A5PLL7 270 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 PRM2P04554 102 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 GPX4P36969 197 aaPredicted RBP11.61□□□□□ -0.55
H3F3C-201ENST00000340398 ZNF79Q15937 498 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 COQ8AQ8NI60 647 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 DIRAS2Q96HU8 199 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 PRRT1Q99946 306 aa11.61□□□□□ -0.55
H3F3C-201ENST00000340398 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
H3F3C-201ENST00000340398 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
H3F3C-201ENST00000340398 ANKRD20A5PA0PJZ0 165 aa11.6□□□□□ -0.55
H3F3C-201ENST00000340398 SNRPGP15A8MWD9 76 aa11.6□□□□□ -0.55
H3F3C-201ENST00000340398 CTDSPLO15194 276 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms