RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
SATB1-201ENST00000338745 LINC00271P0C7V0 271 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 ZNF562Q6V9R5 426 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 PAQR4Q8N4S7 273 aaPredicted RBP13.84□□□□□ -0.19
SATB1-201ENST00000338745 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
SATB1-201ENST00000338745 LYNX1G3V0Z9 82 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 MLNRO43193 412 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 CD5P06127 495 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 LYNX1P0DP58 116 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 TMEM133Q9H2Q1 129 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 MS4A6AQ9H2W1 248 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 CRPP02741 224 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 GUSBP1Q15486 140 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 TNFRSF6BO95407 300 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 NSUN5P1Q3KNT7 163 aa13.84□□□□□ -0.19
SATB1-201ENST00000338745 PRCDQ00LT1 54 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 SPRR3Q9UBC9 169 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 HGFACQ04756 655 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 VGLL1Q99990 258 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 SCRT1Q9BWW7 348 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 TRAV8-1A0A0A6YYK1 113 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 LCNL1Q6ZST4 164 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 ZNF48Q96MX3 618 aaPredicted RBP13.83□□□□□ -0.2
SATB1-201ENST00000338745 DUTP33316 252 aaKnown RBP13.83□□□□□ -0.2
SATB1-201ENST00000338745 NRN1LQ496H8 165 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 FGFBP3Q8TAT2 258 aa13.83□□□□□ -0.2
SATB1-201ENST00000338745 A0A1W2PR77 199 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 TMEM8BA6NDV4 472 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 FANCMQ8IYD8 2048 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 SIP14410 1827 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 PMS2P5A8MQ11 134 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 IMMP1LQ96LU5 166 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 TCRAP04437 139 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 BCL6BQ8N143 479 aaPredicted RBP13.82□□□□□ -0.2
SATB1-201ENST00000338745 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 IGHV1-18A0A0C4DH31 117 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 PSG1P11464 419 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 OR9G4Q8NGQ1 327 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 NUP35Q8NFH5 326 aa13.82□□□□□ -0.2
SATB1-201ENST00000338745 TOMM40O96008 361 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 PAX8Q06710 450 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 TPTE2P1Q5T6R2 138 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 SLC25A39Q9BZJ4 359 aaPredicted RBP13.81□□□□□ -0.2
SATB1-201ENST00000338745 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
SATB1-201ENST00000338745 DOCK6Q96HP0 2047 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 WDR81Q562E7 1941 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 GAGE2BQ13066 116 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 MBNL3Q9NUK0 354 aaKnown RBP13.81□□□□□ -0.2
SATB1-201ENST00000338745 MCRIP2Q9BUT9 160 aaKnown RBP13.81□□□□□ -0.2
SATB1-201ENST00000338745 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 LINC00527Q9UJ94 153 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 CCL1P22362 96 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 LYZL1Q6UWQ5 148 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 TMEM256Q8N2U0 113 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 C11orf44Q8N8P7 122 aa13.81□□□□□ -0.2
SATB1-201ENST00000338745 TRGV11A0A075B6L2 103 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 PRDM6Q9NQX0 595 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 CYTL1Q9NRR1 136 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
SATB1-201ENST00000338745 MYOD1P15172 320 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 LCN12Q6JVE5 192 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 PPBPP02775 128 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 TIMM23O14925 209 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 SH2D1AO60880 128 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 LYPD3O95274 346 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 REG4Q9BYZ8 158 aa13.8□□□□□ -0.2
SATB1-201ENST00000338745 GGTLC1Q9BX51 225 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 SMKR1H3BMG3 65 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 LGALS1P09382 135 aaKnown RBP13.79□□□□□ -0.2
SATB1-201ENST00000338745 PINLYPA6NC86 204 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 FAM90A9PA6NNJ1 464 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
SATB1-201ENST00000338745 MRPS18CQ9Y3D5 142 aaKnown RBP13.79□□□□□ -0.2
SATB1-201ENST00000338745 VMO1Q7Z5L0 202 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 CHCHD5Q9BSY4 110 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 ABHD17AQ96GS6 310 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 LRRK1Q38SD2 2015 aa13.79□□□□□ -0.2
SATB1-201ENST00000338745 TMEM238C9JI98 176 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 ITGB1BP1O14713 200 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
SATB1-201ENST00000338745 DUSP14O95147 198 aaKnown RBP13.78□□□□□ -0.2
SATB1-201ENST00000338745 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 C2orf82Q6UX34 121 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 RCHY1Q96PM5 261 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 KLRD1Q13241 179 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 MAJINQ3KP22 176 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 LAMTOR3Q9UHA4 124 aa13.78□□□□□ -0.2
SATB1-201ENST00000338745 HEATR1Q9H583 2144 aaKnown RBP13.78□□□□□ -0.2
SATB1-201ENST00000338745 GHRHP01286 108 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms