RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZNF414Q96IQ9 312 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 C16orf92Q96LL3 132 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 SS18L2Q9UHA2 77 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 STAG3L2P0CL84 134 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 NPPCP23582 126 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 ZNF502Q8TBZ5 544 aa13.29□□□□□ -0.28
NPHP3-201ENST00000337331 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
NPHP3-201ENST00000337331 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 K7EP34 96 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 APOMO95445 188 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 DLX1P56177 255 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 CFAP161Q6P656 301 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 FBXL15Q9H469 300 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 CYSLTR1Q9Y271 337 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 SLAQ13239 276 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 SRSF8Q9BRL6 282 aaKnown RBP13.28□□□□□ -0.28
NPHP3-201ENST00000337331 THADAQ6YHU6 1953 aa13.28□□□□□ -0.28
NPHP3-201ENST00000337331 MBNL2Q5VZF2 373 aaKnown RBP13.27□□□□□ -0.28
NPHP3-201ENST00000337331 EBLN2Q6P2I7 272 aa13.27□□□□□ -0.28
NPHP3-201ENST00000337331 ZNF497Q6ZNH5 498 aa13.27□□□□□ -0.28
NPHP3-201ENST00000337331 LYPD6Q86Y78 171 aa13.27□□□□□ -0.28
NPHP3-201ENST00000337331 TEX29Q8N6K0 151 aa13.27□□□□□ -0.28
NPHP3-201ENST00000337331 CITED1Q99966 193 aa13.27□□□□□ -0.28
NPHP3-201ENST00000337331 PCNTO95613 3336 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 PLXNA3P51805 1871 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 PRR19A6NJB7 356 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 IGLC1P0CG04 106 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 GAGE13Q4V321 117 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 MRAP2Q96G30 205 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 S4R3C0 116 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 MLNRO43193 412 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 FOXH1O75593 365 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 METTL26Q96S19 204 aa13.27□□□□□ -0.29
NPHP3-201ENST00000337331 CCL3L1P16619 93 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 UCNP55089 124 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 ASPHD1Q5U4P2 390 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 WDR82Q6UXN9 313 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 GGNQ86UU5 652 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 BCL6BQ8N143 479 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-201ENST00000337331 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 ZNF479Q96JC4 524 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 G3V4G9 280 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 EFNB3Q15768 340 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 LINC01560Q8TB33 94 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 CACNG7P62955 275 aa13.26□□□□□ -0.29
NPHP3-201ENST00000337331 ZCCHC24Q8N2G6 241 aaKnown RBP13.26□□□□□ -0.29
NPHP3-201ENST00000337331 MRPL20Q9BYC9 149 aaKnown RBP13.26□□□□□ -0.29
NPHP3-201ENST00000337331 H3BRM9 83 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.25□□□□□ -0.29
NPHP3-201ENST00000337331 WNT2P09544 360 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 CD24P25063 80 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 VWC2Q2TAL6 325 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
NPHP3-201ENST00000337331 THSD7BQ9C0I4 1608 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 A0A1B0GW15 77 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 C9JCJ5 164 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 PEX7O00628 323 aa13.25□□□□□ -0.29
NPHP3-201ENST00000337331 TM4SF5O14894 197 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 YPEL1O60688 119 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 ANOS1P23352 680 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 OR10J6PQ8NGY7 276 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 YPEL2Q96QA6 119 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 B9A039 149 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 M0R3E3 92 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 TGFAP01135 160 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
NPHP3-201ENST00000337331 IGKV3D-15A0A087WSY6 115 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 NTN3O00634 580 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-201ENST00000337331 NUP35Q8NFH5 326 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 TREML4Q6UXN2 200 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 KLK15Q9H2R5 256 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 V9GYV3 84 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SNCGO76070 127 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SAA1P0DJI8 122 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SPACA3Q8IXA5 215 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 TMEM105Q8N8V8 129 aa13.23□□□□□ -0.29
NPHP3-201ENST00000337331 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-201ENST00000337331 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 DUTP33316 252 aaKnown RBP13.22□□□□□ -0.29
NPHP3-201ENST00000337331 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 FRMPD3Q5JV73 1810 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 IGHV3OR16-8A0A075B7F1 116 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 PSPNO60542 156 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 APOBEC3AP31941 199 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-201ENST00000337331 ID1P41134 155 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 PRSS57Q6UWY2 283 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 CHCHD1Q96BP2 118 aaKnown RBP13.22□□□□□ -0.29
NPHP3-201ENST00000337331 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 RNF114Q9Y508 228 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 C17orf100A8MU93 164 aa13.22□□□□□ -0.29
NPHP3-201ENST00000337331 FXYD7P58549 80 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms