RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 UFC1Q9Y3C8 167 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 TRBV9A0A0B4J1U6 114 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 RPL30P62888 115 aaKnown RBP9.66□□□□□ -0.86
HDAC6-201ENST00000334136 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
HDAC6-201ENST00000334136 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 MOSP00540 346 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 ASCL4Q6XD76 172 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 EAF1Q96JC9 268 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 GAFA1Q96PS6 74 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 CLEC5AQ9NY25 188 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 FLNBO75369 2602 aaKnown RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 HIVEP2P31629 2446 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 ANOS1P23352 680 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 PRB3Q04118 309 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 SRSF12Q8WXF0 261 aaKnown RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 DPM3Q9P2X0 92 aa9.65□□□□□ -0.86
HDAC6-201ENST00000334136 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.86
HDAC6-201ENST00000334136 J3KRW8 73 aa9.65□□□□□ -0.87
HDAC6-201ENST00000334136 MC5RP33032 325 aa9.65□□□□□ -0.87
HDAC6-201ENST00000334136 CFHR2P36980 270 aa9.65□□□□□ -0.87
HDAC6-201ENST00000334136 Q96MF0 132 aa9.65□□□□□ -0.87
HDAC6-201ENST00000334136 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.87
HDAC6-201ENST00000334136 PFN1P07737 140 aaKnown RBP9.64□□□□□ -0.87
HDAC6-201ENST00000334136 HOXA4Q00056 320 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-201ENST00000334136 MSMPQ1L6U9 139 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 MAPK1IP1LQ8NDC0 245 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 HSPB7Q9UBY9 170 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 TLN2Q9Y4G6 2542 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 GNG7O60262 68 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 HLA-DRB1P01911 266 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 GCSHP23434 173 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 Q6P435 159 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF324O75467 553 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-201ENST00000334136 PLP1P60201 277 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 SPATA31B1PQ5VZV4 182 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 FAM106CPP0CH98 169 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 TM4SF20Q53R12 229 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-201ENST00000334136 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-201ENST00000334136 DSPP15924 2871 aaKnown RBP9.63□□□□□ -0.87
HDAC6-201ENST00000334136 HIGD1CA8MV81 97 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 OR9G9P0C7N8 305 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 DTX2Q86UW9 622 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
HDAC6-201ENST00000334136 PAX9P55771 341 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM200BQ69YZ2 307 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
HDAC6-201ENST00000334136 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
HDAC6-201ENST00000334136 SELENOTP62341 195 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 TMEM14EPQ6UXP3 125 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 POLR3KQ9Y2Y1 108 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF726P1Q15940 193 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 AP5S1Q9NUS5 200 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 ANAPC10Q9UM13 185 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 ZFP30Q9Y2G7 519 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 NPSP0C0P6 89 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 RPL27AP46776 148 aaKnown RBP9.62□□□□□ -0.87
HDAC6-201ENST00000334136 ERVK11-1P61568 191 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 HIGD1AQ9Y241 93 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 USP24Q9UPU5 2620 aa9.62□□□□□ -0.87
HDAC6-201ENST00000334136 PYYP10082 97 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 HBBP68871 147 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 LY6EQ16553 131 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 HIST2H2BCQ6DN03 193 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 NIT1Q86X76 327 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 USP9XQ93008 2570 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-201ENST00000334136 IGHV4-39P01824 125 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 GNG5P63218 68 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 FOXL1Q12952 345 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 SPRNQ5BIV9 151 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 SCGB1D4Q6XE38 83 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 COQ2Q96H96 371 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 GGTLC1Q9BX51 225 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 CKS2P33552 79 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 LINC01356Q8N9X3 169 aa9.61□□□□□ -0.87
HDAC6-201ENST00000334136 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
HDAC6-201ENST00000334136 IGHV3-35A0A0C4DH35 117 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 624.1 ms