RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ORM2P19652 201 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 ATP5G3P48201 142 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM241Q24JQ0 296 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 S100A7AQ86SG5 101 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 UHRF2Q96PU4 802 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 OR51M1Q9H341 326 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 GAR1Q9NY12 217 aaKnown RBP13.98□□□□□ -0.17
RAB39A-201ENST00000320578 FBXL7Q9UJT9 491 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 ZNF580Q9UK33 172 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 HIGD1AQ9Y241 93 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 OR2J3O76001 311 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 ECSCRQ19T08 205 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 MORN5Q5VZ52 161 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 NECAP1Q8NC96 275 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 PAXXQ9BUH6 204 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 GSX1Q9H4S2 264 aaPredicted RBP13.97□□□□□ -0.17
RAB39A-201ENST00000320578 SOX21Q9Y651 276 aaPredicted RBP13.97□□□□□ -0.17
RAB39A-201ENST00000320578 WI2-2373I1.2A0A1W2PRP0 233 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 OR2C1O95371 312 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 NPPCP23582 126 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM88Q6PEY1 159 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 CBLN2Q8IUK8 224 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 OR5R1Q8NH85 324 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM190Q8WZ59 177 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 C20orf24Q9BUV8 137 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 PRELID1Q9Y255 219 aa13.97□□□□□ -0.17
RAB39A-201ENST00000320578 TRAV5A0A0B4J249 113 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 LINC01548A6NM66 108 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 TEX29Q8N6K0 151 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.96□□□□□ -0.17
RAB39A-201ENST00000320578 RPUSD4Q96CM3 377 aaKnown RBP13.96□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM242Q9NWH2 141 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM14CQ9P0S9 112 aa13.96□□□□□ -0.17
RAB39A-201ENST00000320578 H3BUA1 57 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
RAB39A-201ENST00000320578 DEFB112Q30KQ8 113 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 ZNF491Q8N8L2 437 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 Q8WTZ3 238 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 TCEAL7Q9BRU2 100 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 PRDM13Q9H4Q3 707 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 CELSR2Q9HCU4 2923 aa13.95□□□□□ -0.18
RAB39A-201ENST00000320578 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
RAB39A-201ENST00000320578 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 NUPL2O15504 423 aaKnown RBP13.94□□□□□ -0.18
RAB39A-201ENST00000320578 LYZP61626 148 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 LY6EQ16553 131 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 Q56UQ5 140 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 C15orf54Q8N8G6 183 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 FXYD5Q96DB9 178 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 POLQO75417 2590 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 G3V318 75 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 IER3P46695 156 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 RHOGP84095 191 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 ZNF343Q6P1L6 599 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 RNF125Q96EQ8 232 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 FOXC2Q99958 501 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 SLC25A39Q9BZJ4 359 aaPredicted RBP13.94□□□□□ -0.18
RAB39A-201ENST00000320578 RNF24Q9Y225 148 aa13.94□□□□□ -0.18
RAB39A-201ENST00000320578 TENM4Q6N022 2769 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 DOPEY2Q9Y3R5 2298 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 SH2D7A6NKC9 451 aaPredicted RBP13.93□□□□□ -0.18
RAB39A-201ENST00000320578 FAM223BA6NKX1 122 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 NDUFB4O95168 129 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 CTSGP08311 255 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 OR10J4P0C629 311 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 ZNF674Q2M3X9 581 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 C15orf32Q32M92 178 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 FAM223AQ8IWN6 122 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 SHANK2-AS3Q9BTD1 123 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 CTDSP1Q9GZU7 261 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 CR1P17927 2039 aa13.93□□□□□ -0.18
RAB39A-201ENST00000320578 TSPAN4O14817 238 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 HIST2H2BCQ6DN03 193 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 LY96Q9Y6Y9 160 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 CENPEQ02224 2701 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 ABCA12Q86UK0 2595 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 H3BRN7 92 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 GP9P14770 177 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 S100A7P31151 101 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 RPL23P62829 140 aaKnown RBP13.92□□□□□ -0.18
RAB39A-201ENST00000320578 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
RAB39A-201ENST00000320578 BCL6BQ8N143 479 aaPredicted RBP13.92□□□□□ -0.18
RAB39A-201ENST00000320578 EEF1AKMT3Q96AZ1 226 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 ABCA1O95477 2261 aa13.92□□□□□ -0.18
RAB39A-201ENST00000320578 SCO2A0A1W2PP80 73 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 COLCA2A8K830 154 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 AP4M1O00189 453 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 PYYP10082 97 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 PPIFP30405 207 aaKnown RBP13.91□□□□□ -0.18
RAB39A-201ENST00000320578 AKR1C3P42330 323 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 Q6YL49 198 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 APCP25054 2843 aa13.91□□□□□ -0.18
RAB39A-201ENST00000320578 GGTLC3B5MD39 225 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 C9JCJ5 164 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 IL4P05112 153 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 MYCNOSP40205 109 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms