RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TCF24Q7RTU0 167 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 TRGV9Q99603 122 aa15.34■□□□□ 0.05
RTN4-201ENST00000317610 IGHV1-69-2A0A0G2JMI3 117 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 A8MWL6 223 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 CCL25O15444 150 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 LTAP01374 205 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 C1orf185Q5T7R7 199 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 ETFRF1Q6IPR1 90 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 LINC00322Q6ZN03 302 aaPredicted RBP15.33■□□□□ 0.05
RTN4-201ENST00000317610 CHCHD1Q96BP2 118 aaKnown RBP15.33■□□□□ 0.05
RTN4-201ENST00000317610 FMC1Q96HJ9 113 aa15.33■□□□□ 0.05
RTN4-201ENST00000317610 SPENQ96T58 3664 aaKnown RBP15.33■□□□□ 0.04
RTN4-201ENST00000317610 NAV3Q8IVL0 2385 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 TNFRSF1AP19438 455 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 ZNF137PP52743 207 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 C5orf17Q8NAS9 161 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 OR2D3Q8NGH3 330 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 OR10X1Q8NGY0 326 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 GTSF1Q8WW33 167 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 GFRA4Q9GZZ7 299 aa15.33■□□□□ 0.04
RTN4-201ENST00000317610 PLCE1Q9P212 2302 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 NBEAP1P0C6P0 100 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 DEFB109BQ30KR1 87 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 BLNKQ8WV28 456 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 CLEC5AQ9NY25 188 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 GP9P14770 177 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 ORM2P19652 201 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 CCL8P80075 99 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 VMA21Q3ZAQ7 101 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 RUSC1-AS1Q66K80 236 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 UNQ5815/PRO19632Q6UWF5 114 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 ZNF738Q8NE65 137 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 OR1B1Q8NGR6 318 aa15.32■□□□□ 0.04
RTN4-201ENST00000317610 ICE1Q9Y2F5 2266 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 ZADH2Q8N4Q0 377 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 SGK494Q96LW2 274 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 PTTG1IPP53801 180 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 UBE2V1Q13404 147 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 ST20Q9HBF5 79 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 TPSG1Q9NRR2 321 aa15.31■□□□□ 0.04
RTN4-201ENST00000317610 FAM231BA6NCW3 169 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 SLC25A17O43808 307 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 P01737 135 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 TCRAP04437 139 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 PLP1P60201 277 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 FAM27E3Q08E93 113 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 SVILO95425 2214 aa15.3■□□□□ 0.04
RTN4-201ENST00000317610 IGHV1-24A0A0C4DH33 117 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 C17orf100A8MU93 164 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 NPIPB6E9PJ23 425 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 PAX2Q02962 417 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 PIP4P1Q86T03 277 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 TMEM116Q8NCL8 245 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 OR4C46A6NHA9 309 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 SH2D7A6NKC9 451 aaPredicted RBP15.29■□□□□ 0.04
RTN4-201ENST00000317610 LOC400499M0QZD8 3231 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 TNFRSF13BO14836 293 aaPredicted RBP15.29■□□□□ 0.04
RTN4-201ENST00000317610 CEACAM8P31997 349 aaPredicted RBP15.29■□□□□ 0.04
RTN4-201ENST00000317610 MC5RP33032 325 aa15.29■□□□□ 0.04
RTN4-201ENST00000317610 RBPMS2Q6ZRY4 209 aaKnown RBP15.29■□□□□ 0.04
RTN4-201ENST00000317610 SYS1-DBNDD2H3BUS1 97 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 LGALS7P47929 136 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 RITA1Q96K30 269 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 Q9H3A6 140 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 RPH3ALQ9UNE2 315 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 ARFGEF3Q5TH69 2177 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 DLX6P56179 175 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 LEMD1Q68G75 181 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 Q6ZVH6 145 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 PGLYRP4Q96LB8 373 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 NDFIP1Q9BT67 221 aa15.28■□□□□ 0.04
RTN4-201ENST00000317610 PPIAL4EA0A075B759 164 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 PPIAL4DF5H284 164 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 PPIAL4FP0DN26 164 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 FOXA3P55318 350 aaPredicted RBP15.27■□□□□ 0.04
RTN4-201ENST00000317610 IGFL3Q6UXB1 125 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 C8orf46Q8TAG6 207 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 C22orf15Q8WYQ4 148 aa15.27■□□□□ 0.04
RTN4-201ENST00000317610 TMEM178BH3BS89 294 aa15.27■□□□□ 0.03
RTN4-201ENST00000317610 DEFB123Q8N688 67 aa15.27■□□□□ 0.03
RTN4-201ENST00000317610 TEX45Q8NA69 505 aa15.27■□□□□ 0.03
RTN4-201ENST00000317610 LOC102724200A0A096LPH7 203 aaPredicted RBP15.26■□□□□ 0.03
RTN4-201ENST00000317610 M0QZ24 198 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 FAM87AP0C7U9 286 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 ADIPOQQ15848 244 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 PRR31Q5SQ13 230 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 HCP5Q6MZN7 132 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 C16orf54Q6UWD8 224 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 LHFPL4Q7Z7J7 247 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 H1FXQ92522 213 aaKnown RBP15.26■□□□□ 0.03
RTN4-201ENST00000317610 K7EP13 123 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 NDUFB3O43676 98 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 LEPROTL1O95214 131 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 OR5AL1P0C617 328 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 TMEM108Q6UXF1 575 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 LINC00173Q6ZV60 143 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 Q86TA4 180 aa15.26■□□□□ 0.03
RTN4-201ENST00000317610 DAZAP1Q96EP5 407 aaKnown RBP15.26■□□□□ 0.03
RTN4-201ENST00000317610 APOHP02749 345 aaPredicted RBP15.25■□□□□ 0.03
RTN4-201ENST00000317610 CRYGBP07316 175 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms