RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 SRRQ9GZT4 340 aa12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
EXOSC4-201ENST00000316052 PKD1P98161 4303 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 AP2S1P53680 142 aaPredicted RBP12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 GPR132Q9UNW8 380 aa12.57□□□□□ -0.4
EXOSC4-201ENST00000316052 CRYM-AS1A6NIL9 109 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 BUB3O43684 328 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 IL4P05112 153 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 SSBP1Q04837 148 aaKnown RBP12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 ZNF79Q15937 498 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 SDHCQ99643 169 aaPredicted RBP12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 PRR13Q9NZ81 148 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
EXOSC4-201ENST00000316052 H3BMM0 161 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 RD3LP0DJH9 198 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 IFITM3Q01628 133 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 SURF2Q15527 256 aaPredicted RBP12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 RNF126Q9BV68 326 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
EXOSC4-201ENST00000316052 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 DISC1C4P0D8 188 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 TOMM40O96008 361 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 PSG1P11464 419 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 NPY1RP25929 384 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 DEFA1P59665 94 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 DEFA3P59666 94 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 DEFB1P60022 68 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 SNRPD3P62318 126 aaKnown RBP12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 ETFRF1Q6IPR1 90 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 OR51G1Q8NGK1 321 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
EXOSC4-201ENST00000316052 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
EXOSC4-201ENST00000316052 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
EXOSC4-201ENST00000316052 OR51S1Q8NGJ8 323 aa12.53□□□□□ -0.4
EXOSC4-201ENST00000316052 CTDSPLO15194 276 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 AKAIN1P0CW23 69 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 SULT1A3P0DMM9 295 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 SULT1A4P0DMN0 295 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 OXA1LQ15070 435 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 Q6ZNX1 250 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
EXOSC4-201ENST00000316052 PTTG1O95997 202 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 IFNA10P01566 189 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 AMBPP02760 352 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 IL7P13232 177 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 NUTF2P61970 127 aaKnown RBP12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 IL18Q14116 193 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 GSG1LQ6UXU4 331 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 NOXA1Q86UR1 476 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 IL22RA2Q969J5 263 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 PRRT1Q99946 306 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 U3KQ87 197 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
EXOSC4-201ENST00000316052 GSTZ1O43708 216 aaPredicted RBP12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 NKX2-1P43699 371 aaPredicted RBP12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 FXYD7P58549 80 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 ZNF90Q03938 601 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 KLF9Q13886 244 aaPredicted RBP12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 ZNF705AQ6ZN79 300 aaPredicted RBP12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 LGI3Q8N145 548 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 POM121L12Q8N7R1 296 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 RBKSQ9H477 322 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 HSPB7Q9UBY9 170 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
EXOSC4-201ENST00000316052 MUC4Q99102 2169 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 IGKV1D-37A0A075B6S9 117 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 A0A1B0GVY2 172 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 ANKRD20A5PA0PJZ0 165 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 SUPT4H1P63272 117 aaKnown RBP12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 ASAH1Q13510 395 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 GAMTQ14353 236 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 BAK1Q16611 211 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 NEU1Q99519 415 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
EXOSC4-201ENST00000316052 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
EXOSC4-201ENST00000316052 ZNF705FA8MVS1 300 aaPredicted RBP12.48□□□□□ -0.41
EXOSC4-201ENST00000316052 ZNF705DP0CH99 300 aaPredicted RBP12.48□□□□□ -0.41
EXOSC4-201ENST00000316052 ZNF705BP0CI00 300 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms