RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 DKK4Q9UBT3 224 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 REG1AP05451 166 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 CECR9P0C854 216 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 OR10AG1Q8NH19 301 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 ANKHD1Q8IWZ3 2542 aaKnown RBP13.19□□□□□ -0.3
CCDC8-201ENST00000307522 ISLRO14498 428 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 ZNF391Q9UJN7 358 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 ACACBO00763 2458 aa13.19□□□□□ -0.3
CCDC8-201ENST00000307522 BMI1P35226 326 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 Q71RC1 249 aaPredicted RBP13.18□□□□□ -0.3
CCDC8-201ENST00000307522 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 OR2K2Q8NGT1 345 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 SPCS1Q9Y6A9 102 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 A0A0G2JLM5 398 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 HIST1H1AQ02539 215 aaPredicted RBP13.18□□□□□ -0.3
CCDC8-201ENST00000307522 KRTAP27-1Q3LI81 207 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 PTPRBP23467 1997 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 OR9G1Q8NH87 305 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
CCDC8-201ENST00000307522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
CCDC8-201ENST00000307522 AREGP15514 252 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 GTF2H5Q6ZYL4 71 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 OR2Z1Q8NG97 314 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 PIGBOS1A0A0B4J2F0 54 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 SPRY3O43610 288 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 PROP1O75360 226 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 GUSBP1Q15486 140 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 UFSP1Q6NVU6 142 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
CCDC8-201ENST00000307522 K7ERJ3 54 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
CCDC8-201ENST00000307522 SLC35E4Q6ICL7 350 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 MBD6Q96DN6 1003 aa13.17□□□□□ -0.3
CCDC8-201ENST00000307522 RBMXL3Q8N7X1 1067 aaKnown RBP13.16□□□□□ -0.3
CCDC8-201ENST00000307522 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 TTTY13Q9BZ97 58 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
CCDC8-201ENST00000307522 Q6ZT83 130 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 MAP1LC3CQ9BXW4 147 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 PROCRQ9UNN8 238 aa13.16□□□□□ -0.3
CCDC8-201ENST00000307522 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 TRBV6-6A0A0A6YYG2 114 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 RAB9AP51151 201 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
CCDC8-201ENST00000307522 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 TPPP3Q9BW30 176 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
CCDC8-201ENST00000307522 FAM106CPP0CH98 169 aa13.15□□□□□ -0.31
CCDC8-201ENST00000307522 GPR12P47775 334 aa13.15□□□□□ -0.31
CCDC8-201ENST00000307522 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.31
CCDC8-201ENST00000307522 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.31
CCDC8-201ENST00000307522 LRRC29Q8WV35 223 aa13.15□□□□□ -0.31
CCDC8-201ENST00000307522 NEU4Q8WWR8 484 aaPredicted RBP13.15□□□□□ -0.31
CCDC8-201ENST00000307522 NPFFR1Q9GZQ6 430 aa13.15□□□□□ -0.31
CCDC8-201ENST00000307522 LOC389332A0A1B0GUA5 103 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 PRSS46E5RG02 174 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 CHEK1O14757 476 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 K7EP34 96 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 MPDU1O75352 247 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 VDAC2P45880 294 aaPredicted RBP13.14□□□□□ -0.31
CCDC8-201ENST00000307522 RPS20P60866 119 aaKnown RBP13.14□□□□□ -0.31
CCDC8-201ENST00000307522 AMMECR1Q9Y4X0 333 aaPredicted RBP13.14□□□□□ -0.31
CCDC8-201ENST00000307522 FAM215AQ9Y5M1 114 aa13.14□□□□□ -0.31
CCDC8-201ENST00000307522 PPIAL4EA0A075B759 164 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 SS18L1O75177 396 aaPredicted RBP13.13□□□□□ -0.31
CCDC8-201ENST00000307522 PPIAL4FP0DN26 164 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 NMUP48645 174 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 COQ2Q96H96 371 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 OR51B2Q9Y5P1 312 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 C9orf118A6NHY6 69 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 J3QT63 122 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
CCDC8-201ENST00000307522 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
CCDC8-201ENST00000307522 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 CHODLQ9H9P2 273 aa13.13□□□□□ -0.31
CCDC8-201ENST00000307522 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
CCDC8-201ENST00000307522 PRB3Q04118 309 aaPredicted RBP13.12□□□□□ -0.31
CCDC8-201ENST00000307522 RAB31Q13636 194 aa13.12□□□□□ -0.31
CCDC8-201ENST00000307522 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
CCDC8-201ENST00000307522 IDI2-AS1Q9NZ38 188 aa13.12□□□□□ -0.31
CCDC8-201ENST00000307522 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms