RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 NHLH1Q02575 133 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 PRB3Q04118 309 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 MSMPQ1L6U9 139 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 TMEM164Q5U3C3 297 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 MUC3AQ02505 3323 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 TMSB15BA0A087X1C1 80 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 GOSR1O95249 250 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 APOHP02749 345 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 J3QW42 95 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 DLL1O00548 723 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 OR5AL1P0C617 328 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
COL6A2-201ENST00000300527 PEF1Q9UBV8 284 aaKnown RBP11.86□□□□□ -0.51
COL6A2-201ENST00000300527 F11RQ9Y624 299 aaKnown RBP11.86□□□□□ -0.51
COL6A2-201ENST00000300527 BOD1L1Q8NFC6 3051 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 F2RL2O00254 374 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 Q6ZT83 130 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 GPR82Q96P67 336 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 ZNF257Q9Y2Q1 563 aa11.86□□□□□ -0.51
COL6A2-201ENST00000300527 OR2J3O76001 311 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 PPBPP02775 128 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 LIPFP07098 398 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 FA2HQ7L5A8 372 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.85□□□□□ -0.51
COL6A2-201ENST00000300527 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 ACP1P24666 158 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 NCR2O95944 276 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 RHOGP84095 191 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
COL6A2-201ENST00000300527 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 HIST1H1AQ02539 215 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-201ENST00000300527 RASL11AQ6T310 242 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 C9orf106Q8NAJ2 232 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 H1FXQ92522 213 aaKnown RBP11.84□□□□□ -0.51
COL6A2-201ENST00000300527 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 CCL3L1P16619 93 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 FAM162BQ5T6X4 162 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 PRSS57Q6UWY2 283 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 GOLT1AQ6ZVE7 132 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
COL6A2-201ENST00000300527 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 CD5LO43866 347 aa11.84□□□□□ -0.51
COL6A2-201ENST00000300527 SLC25A17O43808 307 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 CCL11P51671 97 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 RPL24P83731 157 aaKnown RBP11.83□□□□□ -0.52
COL6A2-201ENST00000300527 WT1-ASQ06250 92 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 THYN1Q9P016 225 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 NMUP48645 174 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 ZCCHC24Q8N2G6 241 aaKnown RBP11.83□□□□□ -0.52
COL6A2-201ENST00000300527 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 LYZP61626 148 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 RUSC1-AS1Q66K80 236 aa11.83□□□□□ -0.52
COL6A2-201ENST00000300527 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
COL6A2-201ENST00000300527 IGKV3-15P01624 115 aa11.82□□□□□ -0.52
COL6A2-201ENST00000300527 OR10X1Q8NGY0 326 aa11.82□□□□□ -0.52
COL6A2-201ENST00000300527 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
COL6A2-201ENST00000300527 Q9H3A6 140 aa11.82□□□□□ -0.52
COL6A2-201ENST00000300527 LAMTOR5O43504 91 aa11.82□□□□□ -0.52
COL6A2-201ENST00000300527 MZT1Q08AG7 82 aa11.82□□□□□ -0.52
COL6A2-201ENST00000300527 PCNX1Q96RV3 2341 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 PTPRBP23467 1997 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 TCRBV4S1A1TA0A5B7 111 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 TMEM238C9JI98 176 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 FAM106CPP0CH98 169 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-201ENST00000300527 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 FER1L6-AS1Q8NA97 138 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 PERPQ96FX8 193 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 DSCAMO60469 2012 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 CCL8P80075 99 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 PET117Q6UWS5 81 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 DHRS13Q6UX07 377 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 MDS2Q8NDY4 140 aa11.81□□□□□ -0.52
COL6A2-201ENST00000300527 CNOT1A5YKK6 2376 aaKnown RBP11.8□□□□□ -0.52
COL6A2-201ENST00000300527 A0A1W2PNU3 283 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms