RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RHOGP84095 191 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 Q56UQ5 140 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 Q6ZS46 218 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 TRAV30A0A087WSZ9 112 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 TRAV5A0A0B4J249 113 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 RD3LP0DJH9 198 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 VN1R17PQ8TDU5 208 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 ZNF503Q96F45 646 aa17.86■□□□□ 0.45
PTX3-201ENST00000295927 HYPMO75409 117 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 FABP1P07148 127 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 C15orf32Q32M92 178 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 PQLC2Q6ZP29 291 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 LINC00305Q7Z4B0 112 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 FAM167A-AS1Q96KT0 104 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 MS4A10Q96PG2 267 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 SLC25A2Q9BXI2 301 aa17.85■□□□□ 0.45
PTX3-201ENST00000295927 OR7C2O60412 319 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 NKX6-2Q9C056 277 aaPredicted RBP17.84■□□□□ 0.45
PTX3-201ENST00000295927 TOMM40O96008 361 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 LYZP61626 148 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 IL17RELQ6ZVW7 336 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 NECAP1Q8NC96 275 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 OR4F5Q8NH21 305 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 NOL4LQ96MY1 436 aaPredicted RBP17.84■□□□□ 0.45
PTX3-201ENST00000295927 OR4F4Q96R69 305 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 TXN2Q99757 166 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 PRDM13Q9H4Q3 707 aa17.84■□□□□ 0.45
PTX3-201ENST00000295927 C11orf94C9JXX5 98 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 SNAPINO95295 136 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 FCGR2BP31994 310 aaPredicted RBP17.83■□□□□ 0.44
PTX3-201ENST00000295927 KRTAP1-1Q07627 177 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 CST9LP1Q5W188 147 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 FAM90A2PQ658T7 463 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 OR5AU1Q8NGC0 362 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 VPREB3Q9UKI3 123 aa17.83■□□□□ 0.44
PTX3-201ENST00000295927 YPEL3P61236 119 aaPredicted RBP17.82■□□□□ 0.44
PTX3-201ENST00000295927 OR51G1Q8NGK1 321 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 ZNF502Q8TBZ5 544 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 TMEM167BQ9NRX6 74 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 OR2T8A6NH00 312 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 ATP5G3P48201 142 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 KIAA0141Q14154 515 aaPredicted RBP17.82■□□□□ 0.44
PTX3-201ENST00000295927 TEX29Q8N6K0 151 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 CLRN3Q8NCR9 226 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 YTHDF2Q9Y5A9 579 aaKnown RBP17.82■□□□□ 0.44
PTX3-201ENST00000295927 MXRA5Q9NR99 2828 aa17.82■□□□□ 0.44
PTX3-201ENST00000295927 AKAP9Q99996 3911 aa17.81■□□□□ 0.44
PTX3-201ENST00000295927 AP4M1O00189 453 aa17.81■□□□□ 0.44
PTX3-201ENST00000295927 HOXA3O43365 443 aaPredicted RBP17.81■□□□□ 0.44
PTX3-201ENST00000295927 OR10J4P0C629 311 aa17.81■□□□□ 0.44
PTX3-201ENST00000295927 PPIFP30405 207 aaKnown RBP17.81■□□□□ 0.44
PTX3-201ENST00000295927 HIGD1AQ9Y241 93 aa17.81■□□□□ 0.44
PTX3-201ENST00000295927 NDUFS6O75380 124 aaKnown RBP17.8■□□□□ 0.44
PTX3-201ENST00000295927 CTSGP08311 255 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 ZNF491Q8N8L2 437 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 FAM74A7A6NL05 159 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 TMEM250H0YL14 139 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 SUN5Q8TC36 379 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 MRPL27Q9P0M9 148 aaKnown RBP17.8■□□□□ 0.44
PTX3-201ENST00000295927 PUS1Q9Y606 427 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTX3-201ENST00000295927 TLN2Q9Y4G6 2542 aa17.8■□□□□ 0.44
PTX3-201ENST00000295927 CD5LO43866 347 aa17.79■□□□□ 0.44
PTX3-201ENST00000295927 BTN1A1Q13410 526 aa17.79■□□□□ 0.44
PTX3-201ENST00000295927 Q8WTZ3 238 aa17.79■□□□□ 0.44
PTX3-201ENST00000295927 CHRDL1Q9BU40 450 aa17.79■□□□□ 0.44
PTX3-201ENST00000295927 PAXXQ9BUH6 204 aa17.79■□□□□ 0.44
PTX3-201ENST00000295927 WI2-2373I1.2A0A1W2PRP0 233 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 H3BQ15 152 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 SCGB2A1O75556 95 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 IL4P05112 153 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 PYYP10082 97 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 EEF1AKMT3Q96AZ1 226 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 RNF125Q96EQ8 232 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 TXNDC17Q9BRA2 123 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 OR51M1Q9H341 326 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 TRGV3P03979 118 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 GPR183P32249 361 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 ADMP35318 185 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 UBE2L3P68036 154 aaKnown RBP17.78■□□□□ 0.44
PTX3-201ENST00000295927 ATP5G2Q06055 141 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 CCDC140Q96MF4 163 aa17.78■□□□□ 0.44
PTX3-201ENST00000295927 FAM223BA6NKX1 122 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 NUPL2O15504 423 aaKnown RBP17.77■□□□□ 0.44
PTX3-201ENST00000295927 PDE6DO43924 150 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 OR2C1O95371 312 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 FAM223AQ8IWN6 122 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 SIGLECL1Q8N7X8 197 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 NIPSNAP3BQ9BS92 247 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 C20orf24Q9BUV8 137 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 SLC25A39Q9BZJ4 359 aaPredicted RBP17.77■□□□□ 0.44
PTX3-201ENST00000295927 ARL2-SNX15V9GYD0 113 aa17.77■□□□□ 0.44
PTX3-201ENST00000295927 M0R036 132 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 BRI3O95415 125 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 CLEC3BP05452 202 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 NPPCP23582 126 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 TMEM95Q3KNT9 176 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 ZNF580Q9UK33 172 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 TRBV7-1A0A0A6YYK4 115 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 H3BUA1 57 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 SRP14P37108 136 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms