RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 MGAMO43451 1857 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 NPIPB5A8MRT5 1133 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 WISP1O95388 367 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 SPSB3Q6PJ21 355 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 KNTC1P50748 2209 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 D6R8Y8 96 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 Q6ZRM9 215 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 FAM90A1Q86YD7 464 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 ARTNQ5T4W7 220 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 CENPVQ7Z7K6 275 aaPredicted RBP12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 CCL19Q99731 98 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 DOCK6Q96HP0 2047 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 SEC11AP67812 179 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 IGHV2-70P01814 119 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 NPSP0C0P6 89 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 NBR2O15453 112 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 ESDP10768 282 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 NPC2P61916 151 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 SNHG12Q9BXW3 62 aa12.64□□□□□ -0.39
SHROOM4-201ENST00000289292 ATP5J2P56134 94 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 COPS9Q8WXC6 57 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 RPL15P61313 204 aaKnown RBP12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 MLANAQ16655 118 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 TMEM14EPQ6UXP3 125 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 ZNF815PA8K554 130 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 PRTN3P24158 256 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 CD7P09564 240 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 C8orf46Q8TAG6 207 aa12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 SNRNP200O75643 2136 aaKnown RBP12.63□□□□□ -0.39
SHROOM4-201ENST00000289292 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 ITLN2Q8WWU7 325 aaPredicted RBP12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 CABIN1Q9Y6J0 2220 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 TMEM133Q9H2Q1 129 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 ERVK11-1P61568 191 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 RPUSD1Q9UJJ7 312 aaKnown RBP12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 IGHV1-46P01743 117 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 PLAURQ03405 335 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 ASPHD1Q5U4P2 390 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
SHROOM4-201ENST00000289292 PAX2Q02962 417 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 Q0VFX4 171 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 C1orf122Q6ZSJ8 110 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 TMEM155Q4W5P6 130 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 MS4A6AQ9H2W1 248 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 VCX2Q9H322 139 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 TIMM23O14925 209 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 DNAJC13O75165 2243 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 Q6P435 159 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
SHROOM4-201ENST00000289292 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 TCRAP04437 139 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 FAM57AQ8TBR7 257 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 ARHGEF17Q96PE2 2063 aaPredicted RBP12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 TRAV8-1A0A0A6YYK1 113 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 FAM90A9PA6NNJ1 464 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 C15orf62A8K5M9 175 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 COX11Q9Y6N1 276 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 ATP5L2Q7Z4Y8 100 aa12.6□□□□□ -0.39
SHROOM4-201ENST00000289292 A0A0U1RRA0 63 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 A8MWV9 139 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 ABHD17AQ96GS6 310 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 SLC25A39Q9BZJ4 359 aaPredicted RBP12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 ZNRD1Q9P1U0 126 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 PLXND1Q9Y4D7 1925 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 Q8TAT8 98 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
SHROOM4-201ENST00000289292 IL18BPO95998 194 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 RHOGP84095 191 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 KLRD1Q13241 179 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 TSC2P49815 1807 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 A0A1W2PRX2 142 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 LINC01587Q99440 93 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms