RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZNF329Q86UD4 541 aa15.21■□□□□ 0.03
PCDH1-201ENST00000287008 C3orf56Q8N813 242 aa15.21■□□□□ 0.03
PCDH1-201ENST00000287008 ZNF256Q9Y2P7 627 aaPredicted RBP15.21■□□□□ 0.03
PCDH1-201ENST00000287008 H0YIZ8 118 aa15.21■□□□□ 0.02
PCDH1-201ENST00000287008 ETV2O00321 342 aaPredicted RBP15.21■□□□□ 0.02
PCDH1-201ENST00000287008 LY6G6FQ5SQ64 297 aa15.21■□□□□ 0.02
PCDH1-201ENST00000287008 ARTNQ5T4W7 220 aa15.21■□□□□ 0.02
PCDH1-201ENST00000287008 TRBV6-6A0A0A6YYG2 114 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 ATP5LO75964 103 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 SIGLEC15Q6ZMC9 328 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 OR5AN1Q8NGI8 311 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 C18orf15Q96N68 181 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 ZSWIM8A7E2V4 1837 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 H0YJW9 148 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 KLF17Q5JT82 389 aaPredicted RBP15.2■□□□□ 0.02
PCDH1-201ENST00000287008 ORMDL3Q8N138 153 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 ZNF414Q96IQ9 312 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 C2orf88Q9BSF0 95 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 GPR61Q9BZJ8 451 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 TRGV4A0A0C4DH28 118 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 SLC25A34Q6PIV7 304 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 C12orf54Q6X4T0 127 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 SMIM12Q96EX1 92 aa15.2■□□□□ 0.02
PCDH1-201ENST00000287008 IFITM2Q01629 132 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 PSG1P11464 419 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 SIGLEC9Q9Y336 463 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 PLCE1Q9P212 2302 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 HIGD1CA8MV81 97 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 USMG5Q96IX5 58 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 SCGB3A1Q96QR1 104 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 ALKBH7Q9BT30 221 aaPredicted RBP15.19■□□□□ 0.02
PCDH1-201ENST00000287008 SPATA45Q537H7 98 aa15.19■□□□□ 0.02
PCDH1-201ENST00000287008 WNK1Q9H4A3 2382 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TREML4Q6UXN2 200 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 MRAP2Q96G30 205 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TOMM7Q9P0U1 55 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 MRPS16Q9Y3D3 137 aaKnown RBP15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TRGV11A0A075B6L2 103 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TNFSF13O75888 250 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 APOHP02749 345 aaPredicted RBP15.18■□□□□ 0.02
PCDH1-201ENST00000287008 KLHL30-AS1Q8NEE0 82 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 OR13C6PQ8NH95 151 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TMEM160Q9NX00 188 aa15.18■□□□□ 0.02
PCDH1-201ENST00000287008 TECTAO75443 2155 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 NOTCH4Q99466 2003 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 TMEM50AO95807 157 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 ZNF688P0C7X2 276 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 PROK2Q9HC23 129 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 TICRRQ7Z2Z1 1910 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 LCNL1Q6ZST4 164 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 KIR3DL3Q8N743 410 aa15.17■□□□□ 0.02
PCDH1-201ENST00000287008 GGTLC1Q9BX51 225 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 PMS2P5A8MQ11 134 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 DEFB121Q5J5C9 76 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 F11RQ9Y624 299 aaKnown RBP15.16■□□□□ 0.02
PCDH1-201ENST00000287008 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 TRBV7-1A0A0A6YYK4 115 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 UQCR10Q9UDW1 63 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 H3BRM9 83 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 UQCRFS1P47985 274 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 GCSAMLQ5JQS6 135 aa15.16■□□□□ 0.02
PCDH1-201ENST00000287008 IGKV1-5P01602 117 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 RNF144BQ7Z419 303 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 MAPK1IP1LQ8NDC0 245 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 HINT1P49773 126 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-201ENST00000287008 RPL15P61313 204 aaKnown RBP15.15■□□□□ 0.02
PCDH1-201ENST00000287008 ARL6IP6Q8N6S5 226 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 HIVEP2P31629 2446 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 TCF15Q12870 199 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 JOSD1Q15040 202 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-201ENST00000287008 DNLZQ5SXM8 178 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 TRAV9-1A0A075B6T8 112 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 TRAV8-6A0A0B4J262 113 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 OR10J3Q5JRS4 329 aa15.15■□□□□ 0.02
PCDH1-201ENST00000287008 LINC00473A8K010 186 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 COL5A1-AS1Q5SY13 56 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 TRAV3A0A0B4J244 114 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 IZUMO1RA6ND01 250 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 TDGF1P13385 188 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 UBE2E1P51965 193 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 RPL23P62829 140 aaKnown RBP15.14■□□□□ 0.01
PCDH1-201ENST00000287008 RNASE7Q9H1E1 156 aaKnown RBP15.14■□□□□ 0.01
PCDH1-201ENST00000287008 NCOR2Q9Y618 2525 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 YLPM1P49750 1951 aaKnown RBP15.14■□□□□ 0.01
PCDH1-201ENST00000287008 RNASE1P07998 156 aaKnown RBP15.14■□□□□ 0.01
PCDH1-201ENST00000287008 SUPT4H1P63272 117 aaKnown RBP15.14■□□□□ 0.01
PCDH1-201ENST00000287008 NMSQ5H8A3 153 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 TRGV9Q99603 122 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 SIP14410 1827 aa15.14■□□□□ 0.01
PCDH1-201ENST00000287008 ZNF98A6NK75 572 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 C9orf139Q6ZV77 190 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 Q96MF0 132 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 CARHSP1Q9Y2V2 147 aaKnown RBP15.13■□□□□ 0.01
PCDH1-201ENST00000287008 ERVK11-1P61568 191 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 WFDC12Q8WWY7 111 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 IMMP2LQ96T52 175 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 TMEM183AQ8IXX5 376 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 ST20Q9HBF5 79 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms