RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 UBE2G1P62253 170 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 Q56UQ5 140 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 NEGR1Q7Z3B1 354 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 FAM19A2Q8N3H0 131 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 CACNG5Q9UF02 275 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 TRBV20OR9-2A0A075B6H5 130 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 hADV38S2A0JD32 116 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 SPINT2O43291 252 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 CGB3P0DN86 165 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 CGB7P0DN87 165 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 REG1BP48304 166 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 MEF2CQ06413 473 aaPredicted RBP15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 RFESDQ8TAC1 157 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 PERPQ96FX8 193 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 BPESC1Q9GZL8 116 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 CCL28Q9NRJ3 127 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 CALYQ9NYX4 217 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 LINC00312Q9Y6C7 94 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 FAM181BA6NEQ2 426 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 TUSC2O75896 110 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 SRIP30626 198 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 CX3CL1P78423 397 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 TMEM14EPQ6UXP3 125 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 TMEM136Q6ZRR5 245 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 SIGMAR1Q99720 223 aa15.31■□□□□ 0.04
COL4A3BP-201ENST00000261415 FAM90A26D6RGX4 464 aa15.3■□□□□ 0.04
COL4A3BP-201ENST00000261415 C17orf58Q2M2W7 97 aa15.3■□□□□ 0.04
COL4A3BP-201ENST00000261415 C22orf46C9J442 243 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 SLC17A3O00476 420 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 CEACAM3P40198 252 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 CHRDL1Q9BU40 450 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 COMMD5Q9GZQ3 224 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 KBTBD11-OT1A0A1B0GTJ5 212 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 Q6ZRM9 215 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 GPHA2Q96T91 129 aa15.29■□□□□ 0.04
COL4A3BP-201ENST00000261415 IGKV1D-13A0A0B4J2D9 117 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 HSBP1O75506 76 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 IGKV1-13P0DP09 117 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 MC5RP33032 325 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 LTC4SQ16873 150 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 TMEM200BQ69YZ2 307 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 FAM53AQ6NSI3 398 aaPredicted RBP15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR8I2Q8N0Y5 310 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 FAM168AQ92567 244 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 AP1S3Q96PC3 154 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR2W1Q9Y3N9 320 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 IGHV3-43A0A0B4J1X8 118 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 F2RL2O00254 374 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 RAB29O14966 203 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 IGHV3-43DP0DP04 118 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 SEC11AP67812 179 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 RAB9BQ9NP90 201 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 C1RLQ9NZP8 487 aa15.28■□□□□ 0.04
COL4A3BP-201ENST00000261415 MAP1AP78559 2803 aaPredicted RBP15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 ABCA2Q9BZC7 2435 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 C7orf71A4D174 169 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 C9JCJ5 164 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 BMPR1BO00238 502 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 AZU1P20160 251 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 NPY1RP25929 384 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 CRYBB3P26998 211 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 ZNF714Q96N38 554 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 LINC00574Q9H8X3 128 aa15.27■□□□□ 0.04
COL4A3BP-201ENST00000261415 PPIAL4CA0A0B4J2A2 164 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 M0R2Z0 102 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 AMY1AP04745 511 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 CCL3L1P16619 93 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 KIAA1644Q3SXP7 199 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 EBLN2Q6P2I7 272 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 C10orf105Q8TEF2 133 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 PIMREGQ9BSJ6 248 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 SSBP4Q9BWG4 385 aaPredicted RBP15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 NPCDR1Q9BY65 106 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 JPT1Q9UK76 154 aa15.27■□□□□ 0.03
COL4A3BP-201ENST00000261415 LOXL3P58215 753 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 TMEM70Q9BUB7 260 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 SSBP3Q9BWW4 388 aaPredicted RBP15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 V9GYV3 84 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 WNK2Q9Y3S1 2297 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 FRMD6-AS1P0C7T7 363 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 CD1BP29016 333 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 GNG12Q9UBI6 72 aa15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 RPUSD1Q9UJJ7 312 aaKnown RBP15.26■□□□□ 0.03
COL4A3BP-201ENST00000261415 MED13LQ71F56 2210 aa15.25■□□□□ 0.03
COL4A3BP-201ENST00000261415 C2orf70A6NJV1 201 aa15.25■□□□□ 0.03
COL4A3BP-201ENST00000261415 OR10J4P0C629 311 aa15.25■□□□□ 0.03
COL4A3BP-201ENST00000261415 STAG3L3P0CL85 134 aa15.25■□□□□ 0.03
COL4A3BP-201ENST00000261415 IDI2-AS1Q9NZ38 188 aa15.25■□□□□ 0.03
COL4A3BP-201ENST00000261415 A0A1W2PPV4 95 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 OR4C46A6NHA9 309 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 K7EP34 96 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 CRXO43186 299 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 APCSP02743 223 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 IZUMO4Q1ZYL8 232 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 PRAMEF5Q5TYX0 476 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 C8orf46Q8TAG6 207 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 FAM231BA6NCW3 169 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 K7EN84 100 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 466.8 ms