RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 NARS2Q96I59 477 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-201ENST00000254193 MS4A6AQ9H2W1 248 aa13.36□□□□□ -0.27
SNRPA1-201ENST00000254193 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 IL5P05113 134 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 OR2F1Q13607 317 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 SPATA25Q9BR10 227 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 RETNQ9HD89 108 aa13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 RCL1Q9Y2P8 373 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-201ENST00000254193 DNASE2O00115 360 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 CCNKO75909 580 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 ACOT7LQ6ZUV0 252 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 RNF125Q96EQ8 232 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 GRAMD2BQ96HH9 432 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 RAB40CQ96S21 281 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 TRGV9Q99603 122 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 PBDC1Q9BVG4 233 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 GGTLC1Q9BX51 225 aa13.34□□□□□ -0.27
SNRPA1-201ENST00000254193 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 PMS2P5A8MQ11 134 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 METTL15P1P0C7V9 234 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 STXBP6Q8NFX7 210 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 C2orf50Q96LR7 162 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 FAM110AQ9BQ89 295 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
SNRPA1-201ENST00000254193 C7orf66A4D0T2 115 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 INMT-MINDY4F8WBC2 141 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 FABP1P07148 127 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 DEFA1P59665 94 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 DEFA3P59666 94 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 LYZP61626 148 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 AKR1C1Q04828 323 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 ZNF124Q15973 351 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 C16orf54Q6UWD8 224 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 FAM24BQ8N5W8 94 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 GLMPQ8WWB7 406 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 MAP6D1Q9H9H5 199 aa13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 GPN1Q9HCN4 374 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 LSM5Q9Y4Y9 91 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-201ENST00000254193 SMCO3A2RU48 225 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 SNRPGP15A8MWD9 76 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 BUB3O43684 328 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 EIF2B2P49770 351 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 TAS2R30P59541 319 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 RRAS2P62070 204 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 GSG1LQ6UXU4 331 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
SNRPA1-201ENST00000254193 TRAV2A0A0B4J234 112 aa13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 HELTA6NFD8 242 aa13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 K7EPK0 472 aa13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 TSC22D2O75157 780 aa13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 GATA2P23769 480 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-201ENST00000254193 K7EQG2 157 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 L7N2F9 121 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 DEFB131AP59861 70 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 VAMP2P63027 116 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 ARL16Q0P5N6 197 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 IL15RAQ13261 267 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 TMEM144Q7Z5S9 345 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 STPG3Q8N7X2 389 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 OR10P1Q8NGE3 313 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 MARVELD1Q9BSK0 173 aa13.29□□□□□ -0.28
SNRPA1-201ENST00000254193 HUWE1Q7Z6Z7 4374 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 PRAF2O60831 178 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 SIX6O95475 246 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 S100A10P60903 97 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 DLK1P80370 383 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 LEMD1Q68G75 181 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 DCANP1Q8TF63 244 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 C11orf1Q9H5F2 150 aa13.28□□□□□ -0.28
SNRPA1-201ENST00000254193 GOSR2O14653 212 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 BCAP31P51572 246 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 CAV2P51636 162 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 AP2S1P53680 142 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 APOC4P55056 127 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 PPP1R14BQ96C90 147 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 TENM3Q9P273 2699 aa13.27□□□□□ -0.29
SNRPA1-201ENST00000254193 FAM24AA6NFZ4 105 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 ZNF688P0C7X2 276 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 ORM2P19652 201 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 NUP62P37198 522 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 RAB32Q13637 225 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 CYP2G1PQ6ZSU1 146 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 MGAT4CQ9UBM8 478 aa13.26□□□□□ -0.29
SNRPA1-201ENST00000254193 CFDP00746 253 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-201ENST00000254193 PVALBP20472 110 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-201ENST00000254193 EDA2RQ9HAV5 297 aa13.25□□□□□ -0.29
SNRPA1-201ENST00000254193 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
SNRPA1-201ENST00000254193 NRN1Q9NPD7 142 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms