RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CD24P25063 80 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-201ENST00000238688 PNRC1Q12796 327 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-201ENST00000238688 ICAM4Q14773 271 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 RUSC1-AS1Q66K80 236 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 BRD3OSQ6XYD6 125 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 OR2T6Q8NHC8 308 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 MGAM2Q2M2H8 2515 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 TRRAPQ9Y4A5 3859 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 PSMB11A5LHX3 300 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 F6UZH7 168 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 COX7A2P2O60397 106 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 IGHG2P01859 326 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 IGLC1P0CG04 106 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 C8orf88P0DMB2 117 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 CCL20P78556 96 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
SLIRP-201ENST00000238688 NDPQ00604 133 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 FAM78BQ5VT40 261 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 NECAP1Q8NC96 275 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 PRELID1Q9Y255 219 aa10.36□□□□□ -0.75
SLIRP-201ENST00000238688 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 B4DEV8 164 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 HYPMO75409 117 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 SRP19P09132 144 aaKnown RBP10.35□□□□□ -0.75
SLIRP-201ENST00000238688 EGR2P11161 476 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-201ENST00000238688 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 RHEBQ15382 184 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 HAGHQ16775 308 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 DUX5Q96PT3 197 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 C21orf62Q9NYP8 219 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 DMRT1Q9Y5R6 373 aa10.35□□□□□ -0.75
SLIRP-201ENST00000238688 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 DNAJC9-AS1A6NH13 148 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 H3BUX3 64 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 AP4M1O00189 453 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 TOMM40O96008 361 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 ARL14EPLP0DKL9 152 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 GCHFRP30047 84 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 FGF8P55075 233 aaPredicted RBP10.34□□□□□ -0.75
SLIRP-201ENST00000238688 DEFA5Q01523 94 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 AWAT1Q58HT5 328 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
SLIRP-201ENST00000238688 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 ATP6V0E1O15342 81 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 GNG7O60262 68 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 OR2C1O95371 312 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 RAB9AP51151 201 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 MLANAQ16655 118 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 GCSAMLQ5JQS6 135 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 OR51G1Q8NGK1 321 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 RXFP4Q8TDU9 374 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
SLIRP-201ENST00000238688 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 RARRES2Q99969 163 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 HSPB9Q9BQS6 159 aa10.33□□□□□ -0.76
SLIRP-201ENST00000238688 SEPSECSQ9HD40 501 aaKnown RBP10.33□□□□□ -0.76
SLIRP-201ENST00000238688 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 TRAV41A0A0B4J266 112 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 A0A1B0GV50 99 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 MDFIC2A0A1B0GVS7 189 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 C9JQL5 133 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 AMY1AP04745 511 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 RD3LP0DJH9 198 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 IER3P46695 156 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 TMEM37Q8WXS4 190 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 USMG5Q96IX5 58 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 FAM103A1Q9BTL3 118 aaKnown RBP10.32□□□□□ -0.76
SLIRP-201ENST00000238688 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 WNK1Q9H4A3 2382 aa10.32□□□□□ -0.76
SLIRP-201ENST00000238688 C11orf94C9JXX5 98 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 CLDN34H7C241 214 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 NDUFB8O95169 186 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 RNASE1P07998 156 aaKnown RBP10.31□□□□□ -0.76
SLIRP-201ENST00000238688 PAX6P26367 422 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 CD81P60033 236 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 Q6YL49 198 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 C3orf56Q8N813 242 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 CYB561D1Q8N8Q1 229 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 CLRN3Q8NCR9 226 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 Q8WTZ3 238 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 EEF1AKMT3Q96AZ1 226 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
SLIRP-201ENST00000238688 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
SLIRP-201ENST00000238688 FBXL7Q9UJT9 491 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms