RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 OR1B1Q8NGR6 318 aa14.43□□□□□ -0.1
SNX17-201ENST00000233575 NSD1Q96L73 2696 aaPredicted RBP14.43□□□□□ -0.1
SNX17-201ENST00000233575 NUDT19A8MXV4 375 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 HBE1P02100 147 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 OR5G3P0C626 314 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 RD3LP0DJH9 198 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 FOSL1P15407 271 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 FCGR2BP31994 310 aaPredicted RBP14.42□□□□□ -0.1
SNX17-201ENST00000233575 RHOBP62745 196 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 ATP5G2Q06055 141 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 TOR2AQ5JU69 321 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 ZNF414Q96IQ9 312 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 RARRES2Q99969 163 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 DNAJC4Q9NNZ3 241 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 IGHV3-35A0A0C4DH35 117 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 FAM223BA6NKX1 122 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 COX7A2P2O60397 106 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 LYZP61626 148 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 FAM223AQ8IWN6 122 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 Q8N2B8 174 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 EEF1AKMT3Q96AZ1 226 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 FUT9Q9Y231 359 aa14.42□□□□□ -0.1
SNX17-201ENST00000233575 TRAV30A0A087WSZ9 112 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 TRAV5A0A0B4J249 113 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 C9JQL5 133 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 H3BUA1 57 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 BRI3O95415 125 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 TOMM40O96008 361 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 IGHV3-11P01762 117 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 STAG3L2P0CL84 134 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 STAG3L3P0CL85 134 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 ARL14EPLP0DKL9 152 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 RAB9AP51151 201 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 GUK1Q16774 197 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 HAGHQ16775 308 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 TXN2Q99757 166 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 SERTAD4Q9NUC0 356 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 GNG13Q9P2W3 67 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 IGHG4P01861 327 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 PSMB8P28062 276 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 C10orf113Q5VZT2 155 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 Q6ZSV7 163 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 GATAD1Q8WUU5 269 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 PBDC1Q9BVG4 233 aa14.41□□□□□ -0.1
SNX17-201ENST00000233575 FN1P02751 2386 aaKnown RBP14.4□□□□□ -0.1
SNX17-201ENST00000233575 TRBV12-3P01733 135 aa14.4□□□□□ -0.1
SNX17-201ENST00000233575 YPEL3P61236 119 aaPredicted RBP14.4□□□□□ -0.1
SNX17-201ENST00000233575 SCGB2A2Q13296 93 aa14.4□□□□□ -0.1
SNX17-201ENST00000233575 ZNF491Q8N8L2 437 aa14.4□□□□□ -0.1
SNX17-201ENST00000233575 OR51G1Q8NGK1 321 aa14.4□□□□□ -0.1
SNX17-201ENST00000233575 TRBV7-1A0A0A6YYK4 115 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 PPP5D1E7EU14 171 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 CLDN34H7C241 214 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 IL4P05112 153 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 PLP1P60201 277 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 LINC00305Q7Z4B0 112 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 COMMD1Q8N668 190 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 OR1L4Q8NGR5 311 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 EIF5A2Q9GZV4 153 aaKnown RBP14.39□□□□□ -0.11
SNX17-201ENST00000233575 IGHV3OR16-8A0A075B7F1 116 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 NUPL2O15504 423 aaKnown RBP14.39□□□□□ -0.11
SNX17-201ENST00000233575 CD5P06127 495 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 HILS1P60008 231 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 UQCC3Q6UW78 93 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 ZNF418Q8TF45 676 aaPredicted RBP14.39□□□□□ -0.11
SNX17-201ENST00000233575 ZNF503Q96F45 646 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 PFDN5Q99471 154 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 GNB4Q9HAV0 340 aa14.39□□□□□ -0.11
SNX17-201ENST00000233575 RBFOX3A6NFN3 312 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 HYPMO75409 117 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 USF2Q15853 346 aaPredicted RBP14.38□□□□□ -0.11
SNX17-201ENST00000233575 NARS2Q96I59 477 aaKnown RBP14.38□□□□□ -0.11
SNX17-201ENST00000233575 FAM167A-AS1Q96KT0 104 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 LINC00052Q96N35 136 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 C19orf24Q9BVV8 132 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 TREM1Q9NP99 234 aa14.38□□□□□ -0.11
SNX17-201ENST00000233575 PUS1Q9Y606 427 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX17-201ENST00000233575 TGOLN2O43493 480 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 RNASE1P07998 156 aaKnown RBP14.37□□□□□ -0.11
SNX17-201ENST00000233575 LEMD1Q68G75 181 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 RNF125Q96EQ8 232 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 USMG5Q96IX5 58 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 SLC25A2Q9BXI2 301 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 F8P00451 2351 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 ELOA3CA0A087WX78 387 aaPredicted RBP14.37□□□□□ -0.11
SNX17-201ENST00000233575 WI2-2373I1.2A0A1W2PRP0 233 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 RPLP1P05386 114 aaKnown RBP14.37□□□□□ -0.11
SNX17-201ENST00000233575 FABP1P07148 127 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 KIAA0141Q14154 515 aaPredicted RBP14.37□□□□□ -0.11
SNX17-201ENST00000233575 Q8WTZ3 238 aa14.37□□□□□ -0.11
SNX17-201ENST00000233575 MRPL32Q9BYC8 188 aaKnown RBP14.37□□□□□ -0.11
SNX17-201ENST00000233575 OR2C1O95371 312 aa14.36□□□□□ -0.11
SNX17-201ENST00000233575 CXorf1O96002 111 aa14.36□□□□□ -0.11
SNX17-201ENST00000233575 C8orf88P0DMB2 117 aa14.36□□□□□ -0.11
SNX17-201ENST00000233575 ICAM4Q14773 271 aa14.36□□□□□ -0.11
SNX17-201ENST00000233575 OR5B12Q96R08 314 aa14.36□□□□□ -0.11
SNX17-201ENST00000233575 TECRQ9NZ01 308 aaKnown RBP14.36□□□□□ -0.11
SNX17-201ENST00000233575 MRPL27Q9P0M9 148 aaKnown RBP14.36□□□□□ -0.11
SNX17-201ENST00000233575 HIGD1AQ9Y241 93 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms