RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 S100A8P05109 93 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 SMIM6P0DI80 62 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 PAX9P55771 341 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 OR4D5Q8NGN0 318 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 MITD1Q8WV92 249 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 WFDC10AQ9H1F0 79 aa10.29□□□□□ -0.76
VEGFA-201ENST00000230480 HEYLQ9NQ87 328 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-201ENST00000230480 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 A8MZ25 164 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 GOSR2O14653 212 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
VEGFA-201ENST00000230480 CYB5BO43169 146 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 CLN5O75503 358 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 LY86O95711 162 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 IGLC1P0CG04 106 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 PVALBP20472 110 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-201ENST00000230480 FAM90A2PQ658T7 463 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 BTNL8Q6UX41 500 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 DTD1Q8TEA8 209 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 ASCL2Q99929 193 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 MRPL27Q9P0M9 148 aaKnown RBP10.28□□□□□ -0.76
VEGFA-201ENST00000230480 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
VEGFA-201ENST00000230480 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 SCAF4O95104 1147 aaKnown RBP10.27□□□□□ -0.77
VEGFA-201ENST00000230480 RLN2P04090 185 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 FRMD6-AS1P0C7T7 363 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 IAPPP10997 89 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 NPY1RP25929 384 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 IL15RAQ13261 267 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 TIGITQ495A1 244 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 TMEM116Q8NCL8 245 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 TCEAL7Q9BRU2 100 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 C11orf1Q9H5F2 150 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
VEGFA-201ENST00000230480 SMAD5-AS1Q9Y6J3 95 aa10.27□□□□□ -0.77
VEGFA-201ENST00000230480 AGRNO00468 2067 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 IGKV1OR2-108A0A075B7D4 117 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 TMEM218A2RU14 115 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 RNF222A6NCQ9 220 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 CHEK1O14757 476 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 RPL35P42766 123 aaKnown RBP10.26□□□□□ -0.77
VEGFA-201ENST00000230480 AKR1D1P51857 326 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 SUB1P53999 127 aaKnown RBP eCLIP10.26□□□□□ -0.77
VEGFA-201ENST00000230480 H2BFSP57053 126 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 CD69Q07108 199 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
VEGFA-201ENST00000230480 ENY2Q9NPA8 101 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
VEGFA-201ENST00000230480 UFC1Q9Y3C8 167 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 U3KQE9 123 aa10.26□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV3OR16-13A0A075B7E8 117 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 TRAV14DV4A0A0A6YYC5 116 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV3-74A0A0B4J1X5 117 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 CORTO00230 105 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 SYNGR2O43760 224 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 GNG7O60262 68 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 SIX6O95475 246 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 OPRK1P41145 380 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 NPBWR1P48145 328 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 RND2P52198 227 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
VEGFA-201ENST00000230480 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 C12orf45Q8N5I9 185 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-201ENST00000230480 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 STOML3Q8TAV4 291 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 RNF2Q99496 336 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 C20orf24Q9BUV8 137 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 VSIRQ9H7M9 311 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 TNFSF18Q9UNG2 199 aa10.25□□□□□ -0.77
VEGFA-201ENST00000230480 PUS1Q9Y606 427 aaKnown RBP eCLIP10.25□□□□□ -0.77
VEGFA-201ENST00000230480 RBMY1BA6NDE4 496 aaKnown RBP10.24□□□□□ -0.77
VEGFA-201ENST00000230480 RBMY1EA6NEQ0 496 aaKnown RBP10.24□□□□□ -0.77
VEGFA-201ENST00000230480 CCSO14618 274 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 RBMY1DP0C7P1 496 aaKnown RBP10.24□□□□□ -0.77
VEGFA-201ENST00000230480 GAMTQ14353 236 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 C4orf46Q504U0 113 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 ZNF600Q6ZNG1 722 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 ACOT7LQ6ZUV0 252 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 RHPN1-AS1Q9BWJ2 59 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 HIPK2Q9H2X6 1198 aa10.24□□□□□ -0.77
VEGFA-201ENST00000230480 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
VEGFA-201ENST00000230480 RCL1Q9Y2P8 373 aaKnown RBP10.24□□□□□ -0.77
VEGFA-201ENST00000230480 WRBO00258 174 aa10.23□□□□□ -0.77
VEGFA-201ENST00000230480 IFNA10P01566 189 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms