RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ASH1LQ9NR48 2969 aaKnown RBP11.74□□□□□ -0.53
CCDC47-201ENST00000225726 AP4M1O00189 453 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 UBE2CO00762 179 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 TCF21O43680 179 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 CRYBG3Q68DQ2 2970 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 REC114Q7Z4M0 266 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 SGMS2Q8NHU3 365 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 TMEM250H0YL14 139 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 SMCO4Q9NRQ5 59 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 GAR1Q9NY12 217 aaKnown RBP11.73□□□□□ -0.53
CCDC47-201ENST00000225726 IGHV4-31P0DP07 118 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 AWAT1Q58HT5 328 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
CCDC47-201ENST00000225726 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC47-201ENST00000225726 H3BQ15 152 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 IGLC1P0CG04 106 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 OR4F5Q8NH21 305 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 OR4F4Q96R69 305 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 ANKRD17O75179 2603 aaKnown RBP11.72□□□□□ -0.53
CCDC47-201ENST00000225726 C11orf94C9JXX5 98 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 TGFAP01135 160 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 TMEM219Q86XT9 240 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 FAM110DQ8TAY7 271 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-201ENST00000225726 GOLT1BQ9Y3E0 138 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-201ENST00000225726 RHEBQ15382 184 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 DOK5Q9P104 306 aa11.72□□□□□ -0.53
CCDC47-201ENST00000225726 CHD6Q8TD26 2715 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
CCDC47-201ENST00000225726 UBE2G2P60604 165 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 PATE2Q6UY27 113 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 Q96MF0 132 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 THYN1Q9P016 225 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 SOX21Q9Y651 276 aaPredicted RBP11.71□□□□□ -0.53
CCDC47-201ENST00000225726 ARL2-SNX15V9GYD0 113 aa11.71□□□□□ -0.53
CCDC47-201ENST00000225726 ATP6V0E1O15342 81 aa11.71□□□□□ -0.54
CCDC47-201ENST00000225726 PDE6DO43924 150 aa11.71□□□□□ -0.54
CCDC47-201ENST00000225726 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.54
CCDC47-201ENST00000225726 OR5T1Q8NG75 326 aa11.71□□□□□ -0.54
CCDC47-201ENST00000225726 TVP23CQ96ET8 276 aa11.71□□□□□ -0.54
CCDC47-201ENST00000225726 A6NDX4 124 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 HIST1H1BP16401 226 aaKnown RBP11.7□□□□□ -0.54
CCDC47-201ENST00000225726 PLP1P60201 277 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 KLK9Q2XQG4 91 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 CST9LP1Q5W188 147 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF48Q96MX3 618 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-201ENST00000225726 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-201ENST00000225726 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 F6UZH7 168 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 SLC25A2Q9BXI2 301 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 ATP5G3P48201 142 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 TIGITQ495A1 244 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 HIST2H2BCQ6DN03 193 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 PRDM13Q9H4Q3 707 aa11.7□□□□□ -0.54
CCDC47-201ENST00000225726 CR1P17927 2039 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 H3BUX3 64 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 OR7C2O60412 319 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 MFAP4P55083 255 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 FAM167A-AS1Q96KT0 104 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 NEU1Q99519 415 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 TRAV30A0A087WSZ9 112 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 RAB5AP20339 215 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 ECSCRQ19T08 205 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 OR1B1Q8NGR6 318 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF355PQ9NSJ1 428 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 YTHDF2Q9Y5A9 579 aaKnown RBP11.69□□□□□ -0.54
CCDC47-201ENST00000225726 HYPMO75409 117 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 AMY1AP04745 511 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
CCDC47-201ENST00000225726 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-201ENST00000225726 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 ORM2P19652 201 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-201ENST00000225726 PITPNC1Q9UKF7 332 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.68□□□□□ -0.546e-7■■■□□ 17.9
CCDC47-201ENST00000225726 VPS13CQ709C8 3753 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 NDUFB8O95169 186 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 PSG1P11464 419 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 PNRC1Q12796 327 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-201ENST00000225726 ANKRD39Q53RE8 183 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 SMIM7Q9BQ49 75 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 M0QZK8 103 aa11.68□□□□□ -0.54
CCDC47-201ENST00000225726 OR2J3O76001 311 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms