RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DUSP15Q9H1R2 295 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 CD55P08174 381 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 INAFM2P0DMQ5 153 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 SELLP14151 372 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 RASL10AQ92737 203 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 MRPS18AQ9NVS2 196 aaKnown RBP12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 D6R8Y8 96 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 MLNRO43193 412 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 ACTL10Q5JWF8 245 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 hDV102S1A0JD36 115 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 CGB3P0DN86 165 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 PSG1P11464 419 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 ANXA2RQ3ZCQ2 193 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 PRRC2AP48634 2157 aaKnown RBP12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 SRSF7Q16629 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 ADAMTSL5Q6ZMM2 481 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 CCL20P78556 96 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 RBM3P98179 157 aaKnown RBP12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 SVIPQ8NHG7 77 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 PLXNA2O75051 1894 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 A0A1W2PPV9 198 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 TMEM258P61165 79 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 C8orf46Q8TAG6 207 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 AMELYQ99218 206 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 SPXQ9BT56 116 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 CXCL10P02778 98 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 CGB7P0DN87 165 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 PEBP1P30086 187 aaKnown RBP12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 RAMP3O60896 148 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 SAP30O75446 220 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 KIR3DS1Q14943 382 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 TMEM144Q7Z5S9 345 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 SLC25A38Q96DW6 304 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 ANAPC1Q9H1A4 1944 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 C1QTNF9P0C862 333 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 RHOGP84095 191 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 IFITM1P13164 125 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 C1QL4Q86Z23 238 aa12.23□□□□□ -0.45
SPTLC2-201ENST00000216484 TMEM52Q8NDY8 209 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 VWA8A3KMH1 1905 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 NBR2O15453 112 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 MMP23AO75900 390 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HAMPP81172 84 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 PAX8Q06710 450 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 PRSS22Q9GZN4 317 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 DEPPQ9NTK1 212 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 IFITM3Q01628 133 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 LINC01465Q8N7H1 131 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 NKAPP1Q8N9T2 125 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 LY75O60449 1722 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 A0A0G2JMM0 328 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 A0A1W2PPB8 328 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 KIR3DP1A8MWS1 328 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 UBL5Q9BZL1 73 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BKO60814 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 PYYP10082 97 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BOP23527 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BBP33778 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BDP58876 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BCP62807 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
SPTLC2-201ENST00000216484 A0A1W2PQF6 199 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 CHKB-CPT1BH3BT56 60 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE1Q13065 139 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE4Q13068 117 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE5Q13069 117 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE6Q13070 117 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 SMPXQ9UHP9 88 aa12.21□□□□□ -0.45
SPTLC2-201ENST00000216484 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 NHSQ6T4R5 1651 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 PLXNB3Q9ULL4 1909 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 LIMS1P48059 325 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 FAM201AQ5SY85 155 aa12.21□□□□□ -0.46
SPTLC2-201ENST00000216484 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms