RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 IGKV3D-20A0A0C4DH25 116 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 IGHV3-23P01764 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 CCL1P22362 96 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 ACP7Q6ZNF0 438 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 SCN2AQ99250 2005 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
VCL-201ENST00000211998 FAM166AQ6J272 317 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 SMIM20Q8N5G0 67 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 ALPK2Q86TB3 2170 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
VCL-201ENST00000211998 GGTLC3B5MD39 225 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 H7C1H1 209 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 C1QTNF5Q9BXJ0 243 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 TCRBV4S1A1TA0A5B7 111 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 FAM90A1Q86YD7 464 aa8.65□□□□□ -1.02
VCL-201ENST00000211998 NRXN2Q9P2S2 1712 aa8.65□□□□□ -1.03
VCL-201ENST00000211998 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.03
VCL-201ENST00000211998 SLAQ13239 276 aa8.65□□□□□ -1.03
VCL-201ENST00000211998 TMEM14EPQ6UXP3 125 aa8.65□□□□□ -1.03
VCL-201ENST00000211998 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.03
VCL-201ENST00000211998 IGHV3-49A0A0A0MS15 119 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 KIR2DL5BA0A0G2JN68 375 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 KIR2DL5BA0A0G2JPC4 375 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 KIR2DL5AQ8N109 375 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 FAM57AQ8TBR7 257 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 IGHV2-70DA0A0C4DH43 119 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 UPK2O00526 184 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
VCL-201ENST00000211998 LINC00271P0C7V0 271 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
VCL-201ENST00000211998 NPC2P61916 151 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 LY6EQ16553 131 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 PRSS57Q6UWY2 283 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 CABIN1Q9Y6J0 2220 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 TRAV8-3A0A0A6YYJ7 113 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 ASCL2Q99929 193 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 PARP14Q460N5 1801 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 CELA3AP09093 270 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
VCL-201ENST00000211998 ARPC1AQ92747 370 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 IGLC7A0M8Q6 106 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 CD69Q07108 199 aa8.64□□□□□ -1.03
VCL-201ENST00000211998 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 COX8AP10176 69 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 RFPL3SP0C7P2 107 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 CECR9P0C854 216 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 IGKV1-5P01602 117 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 LINC01560Q8TB33 94 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
VCL-201ENST00000211998 DPM3Q9P2X0 92 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 GBF1Q92538 1859 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 YPEL3P61236 119 aaPredicted RBP8.63□□□□□ -1.03
VCL-201ENST00000211998 RHOGP84095 191 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 PPP1R27Q86WC6 154 aa8.63□□□□□ -1.03
VCL-201ENST00000211998 IGHV3OR16-8A0A075B7F1 116 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 H3BMG7 143 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 SAP30O75446 220 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 RNASE4P34096 147 aaKnown RBP8.62□□□□□ -1.03
VCL-201ENST00000211998 ZNF497Q6ZNH5 498 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 C1QTNF4Q9BXJ3 329 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 H3BMM0 161 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 PF4P02776 101 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
VCL-201ENST00000211998 KLHDC3Q9BQ90 382 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 F2Z2F3 143 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
VCL-201ENST00000211998 FBXL15Q9H469 300 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
VCL-201ENST00000211998 IMMP1LQ96LU5 166 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 IGKV1-12A0A0C4DH73 117 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 IGKV1D-12P01611 117 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 ZNF688P0C7X2 276 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 TAF1LQ8IZX4 1826 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 FAM90A9PA6NNJ1 464 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 TRACP01848 142 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 SAA2P0DJI9 122 aaPredicted RBP8.61□□□□□ -1.03
VCL-201ENST00000211998 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
VCL-201ENST00000211998 TRGV3P03979 118 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 TCRAP04437 139 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 SCN10AQ9Y5Y9 1956 aa8.61□□□□□ -1.03
VCL-201ENST00000211998 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 TRAV40A0A0B4J280 105 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 QRFPP83859 136 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 PRCDQ00LT1 54 aa8.6□□□□□ -1.03
VCL-201ENST00000211998 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms