RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 6430628N08RikA0A0U1RQ45 177 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Esp3J3QN49 87 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Evx1P23683 416 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Slc6a8Q8VBW1 640 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Chst1Q9EQC0 411 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm5108J3QP01 101 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 2210407C18RikQ6YI28 220 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Fam214bQ8BR27 538 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr101Q920Z0 308 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Hspb9Q9DAM3 168 aa13.39□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Awat1A2ADU9 328 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cyb561d1A2AE42 229 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1104A2AVB5 310 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 P01657 111 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 G430049J08RikQ3TL09 166 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 BC147527Q3V185 167 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ankrd34cQ8BLB8 534 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr916Q8VG53 310 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr19Q9JHB2 309 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1154L7MU57 310 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr905L7N1X5 310 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Fgfbp1O70514 251 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 P01634 136 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Saa1P05366 122 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 AhsgP29699 345 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Prrx1P63013 245 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Q3U1D9 316 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 MetrnQ8C1Q4 291 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1260Q8VGN9 310 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Mgst1Q91VS7 155 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 PpifQ99KR7 206 aaKnown RBP13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Flywch2Q9CQE9 139 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tmem50bQ9D1X9 158 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Rhebl1Q9D8T3 184 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Q9DAL9 119 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm21778A0A087WNP8 232 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Platr25A0A1Y7VIZ1 466 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm13083A2AGW5 501 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 AesP63002 197 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Taar3Q5QD16 343 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tmem167bQ80X45 74 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Slc36a4Q8CH36 500 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Sh2d2aQ9QXK9 374 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Trav6n-7A0A075B6A6 116 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Rab33bO35963 229 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tnfsf15Q5UBV8 252 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ifna14Q810G3 189 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Fbxw26Q8BI58 466 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1440Q8VFV4 315 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Plxdc1Q91ZV7 500 aa13.38□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 H3BKT1 185 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 LalbaP29752 143 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 ClcP97400 68 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Nanos1Q80WY3 267 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Harbi1Q8BR93 349 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ido2Q8R0V5 405 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Dok5Q91ZM9 306 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Mrpl30Q9D7N6 160 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cmtm2bQ9DAC0 210 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Prss21Q9JHJ7 324 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ctxnd1A0A1B0GST9 59 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1245A0A1L1SQJ6 307 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 1700025C18RikA2A580 89 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm6890A2BG94 208 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 P18529 117 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Evi2aP20934 223 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Fgf12P61329 243 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 AdmP97297 184 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Oas1bQ60856 376 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Rbpms2Q8VC52 206 aaKnown RBP13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tspan2Q922J6 221 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Mgst2A2RST1 147 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm4133K9J7G6 307 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cldn1O88551 211 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 P01638 115 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Foxn4Q8K3Q3 521 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Slc25a28Q8R0Z5 364 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr1462Q8VFW3 307 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ube2tQ9CQ37 204 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr154Q9QY00 318 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr204E9Q8M0 305 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Serf2P84102 59 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Cnn1Q08091 297 aaKnown RBP13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 ParlQ5XJY4 377 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Exosc2Q8VBV3 293 aaKnown RBP13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Sfxn4Q925N1 313 aa13.37□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm10036E9PYL9 178 aaKnown RBP13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Zfp455Q7M6X9 461 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Olfr802Q8VGJ2 312 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Pam16Q9CQV1 125 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Tbx21Q9JKD8 530 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Gm42543A0A0G2JET4 117 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 F2rl2O08675 369 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Aqp7O54794 303 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Ren1P06281 402 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 PpicP30412 212 aaKnown RBP13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Id4P41139 161 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Slc25a5P51881 298 aaKnown RBP13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 BC049730Q810N3 246 aa13.36□□□□□ -0.27
Ccdc88b-201ENSMUST00000113440 Arl14epQ8BIX3 276 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms