RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 C1QL4Q86Z23 238 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 RPP25LQ8N5L8 163 aaKnown RBP13.6□□□□□ -0.23
PHGDH-234ENST00000642041 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 STXBP6Q8NFX7 210 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 ATP6V0BQ99437 205 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 TRGV9Q99603 122 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 MGST2Q99735 147 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 VAX2Q9UIW0 290 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 SLC45A2Q9UMX9 530 aa13.6□□□□□ -0.23
PHGDH-234ENST00000642041 TRAV40A0A0B4J280 105 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 TEX22C9J3V5 150 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 HMGB3O15347 200 aaKnown RBP13.59□□□□□ -0.23
PHGDH-234ENST00000642041 FSHBP01225 129 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 DLX1P56177 255 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 KLK9Q2XQG4 91 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 ZNF48Q96MX3 618 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-234ENST00000642041 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
PHGDH-234ENST00000642041 TXN2Q99757 166 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 KLK9Q9UKQ9 250 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
PHGDH-234ENST00000642041 A0A1W2PRD5 423 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 A0A1W2PRF3 423 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 A0A1W2PRM7 423 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 TCRBV4S1A1TA0A5B7 111 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 M0QZ24 198 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
PHGDH-234ENST00000642041 NPBWR1P48145 328 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 FHITP49789 147 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 ELLP55199 621 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-234ENST00000642041 CX3CL1P78423 397 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 PRB3Q04118 309 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-234ENST00000642041 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 PQLC2Q6ZP29 291 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 OR4X1Q8NH49 305 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 SSMEM1Q8WWF3 244 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 RAB24Q969Q5 203 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 AJUBAQ96IF1 538 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 WNT10AQ9GZT5 417 aa13.58□□□□□ -0.24
PHGDH-234ENST00000642041 CLN5O75503 358 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 APOC3P02656 99 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 BCL2P10415 239 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 CNTFRP26992 372 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 ACSM6Q6P461 480 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 STPG3Q8N7X2 389 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 Q8N9W7 124 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-234ENST00000642041 TPSG1Q9NRR2 321 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 TMEM167BQ9NRX6 74 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
PHGDH-234ENST00000642041 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 ARHGAP32A7KAX9 2087 aa13.57□□□□□ -0.24
PHGDH-234ENST00000642041 ZFP92A6NM28 416 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 E7EUB6 86 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 STAG3L2P0CL84 134 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 STAG3L3P0CL85 134 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 MYOD1P15172 320 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 AKIRIN2Q53H80 203 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 SOHLH1Q5JUK2 328 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 FAM122CQ6P4D5 195 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 LCN15Q6UWW0 184 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 OR5R1Q8NH85 324 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 MISP3Q96FF7 219 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 LINC00052Q96N35 136 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 ZNF580Q9UK33 172 aa13.56□□□□□ -0.24
PHGDH-234ENST00000642041 CLDN34H7C241 214 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 FCN1O00602 326 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 BRI3O95415 125 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 SFTA3P0C7M3 94 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 OR10J1P30954 320 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-234ENST00000642041 PLP1P60201 277 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 FAM209BQ5JX69 171 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 C9orf139Q6ZV77 190 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 WFDC12Q8WWY7 111 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 TNFRSF19Q9NS68 423 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 FUT9Q9Y231 359 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 TENM3Q9P273 2699 aa13.55□□□□□ -0.24
PHGDH-234ENST00000642041 BIRC6Q9NR09 4857 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 A0A1B0GUS0 222 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 LOC102723971A0A1B0GUV8 181 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 PDE6DO43924 150 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-234ENST00000642041 PNRC1Q12796 327 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-234ENST00000642041 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 NPIPB3Q92617 1050 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 CITED1Q99966 193 aa13.54□□□□□ -0.24
PHGDH-234ENST00000642041 H3BUA1 57 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms