RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TRIP11Q15643 1979 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 FOXH1O75593 365 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 SPATA31B1PQ5VZV4 182 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 PMS2CLQ68D20 193 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 Q8NFD4 153 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 ITLN1Q8WWA0 313 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 TMEM158Q8WZ71 300 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 DUX5Q96PT3 197 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 CACNA1SQ13698 1873 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 DDX60LQ5H9U9 1706 aaKnown RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 SOCS3O14543 225 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 SAP30O75446 220 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 CISD3P0C7P0 127 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 FAM106AQ4KMX7 169 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 ANKRD29Q8N6D5 301 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 PKD1L3Q7Z443 1732 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 LYL1P12980 280 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 CD69Q07108 199 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 CDCP2Q5VXM1 449 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 RPP25LQ8N5L8 163 aaKnown RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 S4R3C0 116 aa9.09□□□□□ -0.95
KCNMA1-259ENST00000639406 TRAV40A0A0B4J280 105 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 WNT2P09544 360 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 CEND1Q8N111 149 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 SMRP1Q8NCR6 262 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 CCL8P80075 99 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 CHD5Q8TDI0 1954 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 FOXS1O43638 330 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 SUPT4H1P63272 117 aaKnown RBP9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 OR9G1Q8NH87 305 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 PRADC1Q9BSG0 188 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 TCRBV4S1A1TA0A5B7 111 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 K7ERJ3 54 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 HERV-K104P63124 156 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 TMEM42Q69YG0 159 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 UNQ6494/PRO21346Q6UXR6 183 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
KCNMA1-259ENST00000639406 C21orf140B9A014 251 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 J3QRE1 110 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 TMEM54Q969K7 222 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 IGKV1-8A0A0C4DH67 115 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 VGLL1Q99990 258 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 SYNJ2BPP57105 145 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 DUSP15Q9H1R2 295 aaPredicted RBP9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 A0A0A6YYD4 124 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 IGHV1-24A0A0C4DH33 117 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 SLC25A39Q9BZJ4 359 aaPredicted RBP9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
KCNMA1-259ENST00000639406 C15orf61A6NNL5 157 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 LEPROTO15243 131 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 TCRAP04437 139 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 FBLN5Q9UBX5 448 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 PCM1Q15154 2024 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 A0A087WV48 116 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 Q6ZS52 159 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 MALP21145 153 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 PPP1R32Q7Z5V6 425 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 OR11H6Q8NGC7 330 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 RNF115Q9Y4L5 304 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 KIR2DL5BA0A0G2JN68 375 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 KIR2DL5BA0A0G2JPC4 375 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 DRD3P35462 400 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 KIR2DL5AQ8N109 375 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
KCNMA1-259ENST00000639406 PAX4O43316 350 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 PAQR4Q8N4S7 273 aaPredicted RBP9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 CD7P09564 240 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 J3QKU1 62 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 UPK2O00526 184 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 MORN5Q5VZ52 161 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
KCNMA1-259ENST00000639406 FGF6P10767 208 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 SCN8AQ9UQD0 1980 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 TTC3P53804 2025 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 C5orf47Q569G3 176 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 KLF14Q8TD94 323 aaPredicted RBP9.04□□□□□ -0.96
KCNMA1-259ENST00000639406 LY75O60449 1722 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms