RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 HBA1P69905 142 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GRK1Q15835 563 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HIST2H2BEQ16778 126 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LTC4SQ16873 150 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 AADACL3Q5VUY0 350 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ZNF322Q6U7Q0 402 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PATE2Q6UY27 113 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PACRGLQ8N7B6 248 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 WFDC5Q8TCV5 224 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 THEM6Q8WUY1 208 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 C11orf40Q8WZ69 217 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HIST1H2BHQ93079 126 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PHB2Q99623 299 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HIST1H2BNQ99877 126 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HIST1H2BMQ99879 126 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 Q9BRP9 147 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 COMMD5Q9GZQ3 224 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TMEM126AQ9H061 195 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 JPT1Q9UK76 154 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR52A1Q9UKL2 312 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GINS2Q9Y248 185 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 UTP11Q9Y3A2 253 aaKnown RBP0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ASB4Q9Y574 426 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 BCL9O00512 1426 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FAM135BQ49AJ0 1406 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 NCKAP5O14513 1909 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 MYH1P12882 1939 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 AKAP11Q9UKA4 1901 aa0.72□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SHROOM2Q13796 1616 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RFX7Q2KHR2 1363 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MPDZO75970 2070 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PKD1L2Q7Z442 2459 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRAV9-1A0A075B6T8 112 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRAV7A0A075B6U4 112 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRGV5A0A0B4J1U4 118 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 A0A0J9YW62 118 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TRDV1A0A1B0GX56 115 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MAP1LC3B2A6NCE7 125 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 H3BPC8 53 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 H7C1C5 153 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 I3L521 148 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 UBFD1O14562 309 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HMGB3O15347 200 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ARPC5O15511 151 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GNRH2O43555 120 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PIAS1O75925 651 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CRYZL1O95825 349 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IFNA10P01566 189 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GZMBP10144 247 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RPL7P18124 248 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HLA-DMBP28068 263 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CRABP2P29373 138 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CRABP1P29762 137 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PHBP35232 272 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RAB13P51153 203 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 INSL3P51460 131 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DEFA1P59665 94 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RAB4BP61018 213 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LCN6P62502 163 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RPS28P62857 69 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SUPT4H1P63272 117 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SARNPP82979 210 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PSG9Q00887 426 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RPL18Q07020 188 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SURF2Q15527 256 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RRN3P1Q2M238 152 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ARHGAP11BQ3KRB8 267 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SPANXN3Q5MJ09 141 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 FAM27BQ5VT28 67 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 RPL22L1Q6P5R6 122 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PHF5AQ7RTV0 110 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TMEM35BQ8NCS4 154 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR51T1Q8NGJ9 327 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 OR4C16Q8NGL9 310 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PPTC7Q8NI37 304 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 SLC25A40Q8TBP6 338 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ZHX1-C8orf76Q96EF9 292 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 GPX7Q96SL4 187 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HSPB9Q9BQS6 159 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 DOHHQ9BU89 302 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ULBP3Q9BZM4 244 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 IMUPQ9GZP8 106 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MAP1LC3BQ9GZQ8 125 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TUBA4BQ9H853 241 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 C8orf4Q9NR00 106 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TVP23BQ9NYZ1 205 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CCL26Q9Y258 94 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 HSPE1-MOB4S4R3N1 261 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CUL7Q14999 1698 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 CDK5RAP2Q96SN8 1893 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 PRG4Q92954 1404 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MDC1Q14676 2089 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 POLEQ07864 2286 aa0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 MED23Q9ULK4 1368 aa0.7□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 LAMB1P07942 1786 aa0.7□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ALPK3Q96L96 1907 aa0.7□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 ANAPC1Q9H1A4 1944 aa0.7□□□□□ -2.3
NPHP3-ACAD11-202ENST00000632629 KIAA2026Q5HYC2 2103 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms