RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 TOGARAM1Q9Y4F4 1720 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 RP1P56715 2156 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 MLNRO43193 412 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 LHBP01229 141 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 IGHV1-2P23083 117 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 LYPD1Q8N2G4 141 aa7.41□□□□□ -1.22
GABRB3-216ENST00000628124 MBNL3Q9NUK0 354 aaKnown RBP7.41□□□□□ -1.22
GABRB3-216ENST00000628124 E9PLN8 166 aa7.4□□□□□ -1.22
GABRB3-216ENST00000628124 PMVKQ15126 192 aa7.4□□□□□ -1.22
GABRB3-216ENST00000628124 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
GABRB3-216ENST00000628124 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
GABRB3-216ENST00000628124 B4DSR2 109 aa7.4□□□□□ -1.22
GABRB3-216ENST00000628124 CHCHD2Q9Y6H1 151 aaPredicted RBP7.4□□□□□ -1.22
GABRB3-216ENST00000628124 D6R8Y8 96 aa7.4□□□□□ -1.23
GABRB3-216ENST00000628124 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.23
GABRB3-216ENST00000628124 A0A1B0GWJ7 208 aa7.4□□□□□ -1.23
GABRB3-216ENST00000628124 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.23
GABRB3-216ENST00000628124 RICTORQ6R327 1708 aa7.4□□□□□ -1.23
GABRB3-216ENST00000628124 EVPLQ92817 2033 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 RAMP1O60894 148 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 NCR2O95944 276 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 IGHG3P01860 377 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 SPINK8P0C7L1 97 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 C15orf32Q32M92 178 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 CSTL1Q9H114 145 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 TRPM6Q9BX84 2022 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 FAM223BA6NKX1 122 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 EFNA4P52798 201 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 GUSBP1Q15486 140 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 IL17RELQ6ZVW7 336 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 FAM223AQ8IWN6 122 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 TRGV9Q99603 122 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 FBLN5Q9UBX5 448 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 TRBV24-1A0A075B6N3 115 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-216ENST00000628124 SELLP14151 372 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
GABRB3-216ENST00000628124 MRAPQ8TCY5 172 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 COLQQ9Y215 455 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-216ENST00000628124 LY96Q9Y6Y9 160 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 C1QL2Q7Z5L3 287 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 C3orf56Q8N813 242 aa7.39□□□□□ -1.23
GABRB3-216ENST00000628124 IL18BPO95998 194 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 RSPO3Q9BXY4 272 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 C9JAW5 83 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 KLF5Q13887 457 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 WISP3O95389 354 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 CGB7P0DN87 165 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 TIMP3P35625 211 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 Q5BKY6 102 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 LYZL1Q6UWQ5 148 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 C11orf44Q8N8P7 122 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 IGHV3-53P01767 116 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 RFPL3SP0C7P2 107 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 LHX2P50458 406 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 SRSF7Q16629 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 DSCR8Q96T75 97 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 SMIM2Q9BVW6 85 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 NUP98P52948 1817 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
GABRB3-216ENST00000628124 CGB3P0DN86 165 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 SRD5A1P18405 259 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 ID3Q02535 119 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 LIME1Q9H400 295 aa7.38□□□□□ -1.23
GABRB3-216ENST00000628124 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BKO60814 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BJP06899 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BOP23527 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BBP33778 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BDP58876 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BCP62807 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST2H2BEQ16778 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BHQ93079 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BNQ99877 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HIST1H2BMQ99879 126 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 PMS2P5A8MQ11 134 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 E9PQ18 207 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 TCRAP04437 139 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 CTSBP07858 339 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 SUPT4H1P63272 117 aaKnown RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 ZNF474Q6S9Z5 364 aaPredicted RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 HAMPP81172 84 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 PIP4P2Q8N4L2 257 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 C9orf106Q8NAJ2 232 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 RPUSD1Q9UJJ7 312 aaKnown RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 DDX60Q8IY21 1712 aaKnown RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 CSRP1P21291 193 aaKnown RBP7.37□□□□□ -1.23
GABRB3-216ENST00000628124 WBP1Q96G27 269 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
GABRB3-216ENST00000628124 M0R1W7 72 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms