RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 HIST1H2BDP58876 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BCP62807 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST2H2BEQ16778 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BHQ93079 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BNQ99877 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BMQ99879 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 TNFRSF19Q9NS68 423 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 PHOX2AO14813 284 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 MOSP00540 346 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 PRB1P04280 392 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 VMO1Q7Z5L0 202 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 NPBQ8NG41 125 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 OCC1Q8TAD7 63 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 SFRP2Q96HF1 295 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 LY96Q9Y6Y9 160 aa15.71■□□□□ 0.11
PCDHB11-202ENST00000624887 TRAV5A0A0B4J249 113 aa15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 NBR2O15453 112 aa15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 GGCTO75223 188 aaKnown RBP15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 NDUFA3O95167 84 aa15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 OR5AU1Q8NGC0 362 aa15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 ZNF355PQ9NSJ1 428 aa15.71■□□□□ 0.1
PCDHB11-202ENST00000624887 IGSF10Q6WRI0 2623 aa15.7■□□□□ 0.1
PCDHB11-202ENST00000624887 OR2T10Q8NGZ9 312 aa15.7■□□□□ 0.1
PCDHB11-202ENST00000624887 MDFIC2A0A1B0GVS7 189 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 GGTLC3B5MD39 225 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 SSTP61278 116 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 KCNIP4Q6PIL6 250 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 FRZBQ92765 325 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 EAF1Q96JC9 268 aaPredicted RBP15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 IMMP2LQ96T52 175 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 A0A1W2PPQ1 181 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 A0A1W2PRD5 423 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 A0A1W2PRF3 423 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 A0A1W2PRM7 423 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 CNIH1O95406 144 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 CRYBB3P26998 211 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 NDUFA6P56556 154 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 UBE2L3P68036 154 aaKnown RBP15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 CCDC144NLQ6NUI1 221 aa15.69■□□□□ 0.1
PCDHB11-202ENST00000624887 OOSP1A8MZH6 123 aa15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 PPP5D1E7EU14 171 aa15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 TRGC1P0CF51 173 aa15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 HIST1H1BP16401 226 aaKnown RBP15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 HOXB4P17483 251 aaPredicted RBP15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 MINOS1Q5TGZ0 78 aa15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 MINOS1-NBL1R4GNA1 71 aa15.68■□□□□ 0.1
PCDHB11-202ENST00000624887 LGALS4P56470 323 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 SUMO1P63165 101 aaKnown RBP15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 SSX2Q16385 188 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 TEX38Q6PEX7 206 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 LINC00305Q7Z4B0 112 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 PAXXQ9BUH6 204 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 IGHV3-21A0A0B4J1V1 117 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 HELTA6NFD8 242 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 K7EN84 100 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 TYMSP04818 313 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 CD24P25063 80 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 LCN2P80188 198 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 DEFA6Q01524 100 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 FOXL1Q12952 345 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 CLEC12BQ2HXU8 276 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 ZNF843Q8N446 348 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 IGFBPL1Q8WX77 278 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 WNT10AQ9GZT5 417 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 PRDM13Q9H4Q3 707 aa15.67■□□□□ 0.1
PCDHB11-202ENST00000624887 I3L2K1 104 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 OVOL3O00110 214 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 PYYP10082 97 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 HNF1AP20823 631 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 FAM3BP58499 235 aaPredicted RBP15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 HES1Q14469 280 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 HIST3H2BBQ8N257 126 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 PERPQ96FX8 193 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 IGHV2-70DA0A0C4DH43 119 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 ORM2P19652 201 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 PLP1P60201 277 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 C5orf64Q2M2E5 130 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 FBLN7Q53RD9 439 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 DYNAPQ8N1N2 210 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 OR10G8Q8NGN5 311 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 OR1B1Q8NGR6 318 aa15.66■□□□□ 0.1
PCDHB11-202ENST00000624887 FXYD3Q14802 87 aa15.65■□□□□ 0.1
PCDHB11-202ENST00000624887 STXBP6Q8NFX7 210 aa15.65■□□□□ 0.1
PCDHB11-202ENST00000624887 FXYD5Q96DB9 178 aa15.65■□□□□ 0.1
PCDHB11-202ENST00000624887 BTF3L4Q96K17 158 aa15.65■□□□□ 0.1
PCDHB11-202ENST00000624887 GNG4P50150 75 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 LMO4P61968 165 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 CENPWQ5EE01 88 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 C9orf152Q5JTZ5 239 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 BPESC1Q9GZL8 116 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 CFAP46Q8IYW2 2715 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 HYPMO75409 117 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 IGLC1P0CG04 106 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 EBI3Q14213 229 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 Q8N6K4 173 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 OR1L6Q8NGR2 347 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 SGMS2Q8NHU3 365 aa15.64■□□□□ 0.09
PCDHB11-202ENST00000624887 PAX1P15863 534 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms