RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 M0QZK8 103 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 NDPQ00604 133 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF56Q15929 161 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 PRSS8Q16651 343 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 PRO1933Q9H354 126 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 HLA-DRB1P01911 266 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 APCSP02743 223 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 RPL15P61313 204 aaKnown RBP8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 GNG5P63218 68 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 MLANAQ16655 118 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 FAM74A3Q4VXF1 159 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 Q6ZN92 141 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 FREM2Q5SZK8 3169 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 DKK4Q9UBT3 224 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 CRXO43186 299 aaPredicted RBP8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 IGKV1-5P01602 117 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 AREGP15514 252 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 MPZP25189 248 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 RAB9AP51151 201 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 C5orf64Q2M2E5 130 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 LDLRAD2Q5SZI1 272 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 C12orf57Q99622 126 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 YTHDF2Q9Y5A9 579 aaKnown RBP8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 FAM74A7A6NL05 159 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 BUB1B-PAK6H3BSN5 160 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 SLC17A3O00476 420 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 CEACAM4O75871 244 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 GCGP01275 180 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 SLC25A16P16260 332 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 NUTF2P61970 127 aaKnown RBP8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 HERPUD1Q15011 391 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 NHLRC3Q5JS37 347 aa8.3□□□□□ -1.08
SMARCA1-205ENST00000617310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 SAP30O75446 220 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 PRTN3P24158 256 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 TSPOP30536 169 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 PSG9Q00887 426 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 RELBQ01201 579 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 FBLN7Q53RD9 439 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 DPPA3Q6W0C5 159 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 LINC01356Q8N9X3 169 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 RNASEH2CQ8TDP1 164 aaKnown RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 CACNG8Q8WXS5 425 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 PPIFP30405 207 aaKnown RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 ID3Q02535 119 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 MMP23AO75900 390 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 SCGB1D4Q6XE38 83 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 CD99P14209 185 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 ATP5IP56385 69 aaPredicted RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 IFITM2Q01629 132 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 PAX8Q06710 450 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 LCNL1Q6ZST4 164 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 LHFPL1Q86WI0 220 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 TNFRSF14Q92956 283 aa8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 MRPL32Q9BYC8 188 aaKnown RBP8.29□□□□□ -1.08
SMARCA1-205ENST00000617310 PLXNA2O75051 1894 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 DEFB121Q5J5C9 76 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 C3orf56Q8N813 242 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 KLHL30-AS1Q8NEE0 82 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF502Q8TBZ5 544 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 C18orf12Q96KH6 178 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 LINC01587Q99440 93 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 PSMG3Q9BT73 122 aaPredicted RBP8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 IGLV3-9A0A075B6K5 115 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 IGKV1-6A0A0C4DH72 117 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 B4DEV8 164 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 H0YJW9 148 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 TRGC2P03986 189 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 NUP210Q8TEM1 1887 aaPredicted RBP8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 A0A0G2JRQ6 117 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 QRFPP83859 136 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
SMARCA1-205ENST00000617310 G3V318 75 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 CNTFRP26992 372 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 SRSF4Q08170 494 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 SRSF7Q16629 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 IGFL4Q6B9Z1 124 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 FAM71F2Q6NXP2 309 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 Q9H3A6 140 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 CBY3A6NI87 242 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms