RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 A0A1W2PPB8 328 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 KIR3DP1A8MWS1 328 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 CD5LO43866 347 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 GREB1LQ9C091 1923 aaPredicted RBP8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 A0A087X0K7 114 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 TRGV3P03979 118 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 FAM71F2Q6NXP2 309 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 CLEC2AQ6UVW9 174 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SNHG12Q9BXW3 62 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SEPSECSQ9HD40 501 aaKnown RBP8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 COX11Q9Y6N1 276 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SYS1-DBNDD2H3BUS1 97 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV1D-33P01593 117 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV1-33P01594 117 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 CELA3BP08861 270 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 ESDP10768 282 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 PAX1P15863 534 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV1-2P23083 117 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 SPATA31B1PQ5VZV4 182 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 RTN4RL2Q86UN3 420 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 ARPC1AQ92747 370 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 DMRTA2Q96SC8 542 aa8.85□□□□□ -0.99
CLTCL1-209ENST00000617103 WNK3Q9BYP7 1800 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 IGKV1-27A0A075B6S5 117 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 TRAV5A0A0B4J249 113 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 F2Z2F3 143 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 SLX1AQ9BQ83 275 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 CHTOPQ9Y3Y2 248 aaKnown RBP8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 PSG1P11464 419 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 PAX2Q02962 417 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 FOXF2Q12947 444 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 KIR3DL3Q8N743 410 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 POLR3KQ9Y2Y1 108 aaPredicted RBP8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 DOCK3Q8IZD9 2030 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 EFEMP2O95967 443 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 IGHV4-39P01824 125 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
CLTCL1-209ENST00000617103 MED12Q93074 2177 aa8.84□□□□□ -1
CLTCL1-209ENST00000617103 TRAV8-4A0A0B4J246 113 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 PLNP26678 52 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 C8orf46Q8TAG6 207 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 MGST2Q99735 147 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 GTSF1LQ9H1H1 148 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 RBBP6Q7Z6E9 1792 aaKnown RBP8.83□□□□□ -1
CLTCL1-209ENST00000617103 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
CLTCL1-209ENST00000617103 CCL3L1P16619 93 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 PPP1R27Q86WC6 154 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 RPRMLQ8N4K4 120 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 TRBV7-9A0A0J9YWB2 115 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 LINC01549A6NIU2 74 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 IGHV2-5P01817 119 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 IFI27P40305 119 aaPredicted RBP8.83□□□□□ -1
CLTCL1-209ENST00000617103 TMEM101Q96IK0 257 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 DUX5Q96PT3 197 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 ZDBF2Q9HCK1 2354 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 CNTFRP26992 372 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
CLTCL1-209ENST00000617103 Q0VG73 95 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 ATP1A1-AS1Q5TC04 95 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 NUP35Q8NFH5 326 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 NABP1Q96AH0 204 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 SELENOKQ9Y6D0 94 aa8.83□□□□□ -1
CLTCL1-209ENST00000617103 EFNA2O43921 213 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 DMRTC2Q8IXT2 367 aaPredicted RBP8.82□□□□□ -1
CLTCL1-209ENST00000617103 BMPERQ8N8U9 685 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 ZIC4Q8N9L1 334 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 LOC102723996A0A087X1L8 192 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 IGLV3-19P01714 112 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 CFPP27918 469 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 LHX2P50458 406 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 LY6EQ16553 131 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 RNF182Q8N6D2 247 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 FGFBP3Q8TAT2 258 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 LRRC37AA6NMS7 1700 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 TRAV2A0A0B4J234 112 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 EVI2AP22794 236 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 KIR3DS1Q14943 382 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 C10orf91Q5T1B1 145 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 GTSCR1Q86UQ5 136 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 VWCEQ96DN2 955 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 YAE1D1Q9NRH1 226 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 ERG28Q9UKR5 140 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 D6R8Y8 96 aa8.82□□□□□ -1
CLTCL1-209ENST00000617103 NBR2O15453 112 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 PPIFP30405 207 aaKnown RBP8.81□□□□□ -1
CLTCL1-209ENST00000617103 RNASE4P34096 147 aaKnown RBP8.81□□□□□ -1
CLTCL1-209ENST00000617103 FAM27E3Q08E93 113 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 RNF144BQ7Z419 303 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 PATJQ8NI35 1801 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 CLEC19AQ6UXS0 136 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 NYNRINQ9P2P1 1898 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms