RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 FAM106CPP0CH98 169 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 STAG3L2P0CL84 134 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 STAG3L3P0CL85 134 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 SUMO1P63165 101 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 TIGITQ495A1 244 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 CCDC144NLQ6NUI1 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PATE2Q6UY27 113 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 BCL6BQ8N143 479 aaPredicted RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 OR5AU1Q8NGC0 362 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 TVP23CQ96ET8 276 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 AJUBAQ96IF1 538 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RBM14Q96PK6 669 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 SPOCK3Q9BQ16 436 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 DNAJC4Q9NNZ3 241 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 SMCO4Q9NRQ5 59 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 SELENOKQ9Y6D0 94 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 MTORP42345 2549 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 ZNF469Q96JG9 3925 aaPredicted RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 CXorf1O96002 111 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 CRYBA1P05813 215 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RANP62826 216 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 C10orf113Q5VZT2 155 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 C1orf122Q6ZSJ8 110 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 LINC00305Q7Z4B0 112 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 ZNF114Q8NC26 417 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 OR1P1Q8NH06 330 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RNASEH2CQ8TDP1 164 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 CACNG8Q8WXS5 425 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 ARPC1AQ92747 370 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 ZNF503Q96F45 646 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 LINC00479Q96M42 142 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RASL11BQ9BPW5 248 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 FUT9Q9Y231 359 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 KLF2Q9Y5W3 355 aaPredicted RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 MYO9AB2RTY4 2548 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 IGHV3OR16-13A0A075B7E8 117 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 IGHV3-74A0A0B4J1X5 117 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 TCRBV4S1A1TA0A5B7 111 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 OR2T8A6NH00 312 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 COLCA2A8K830 154 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 SEC14L6B5MCN3 397 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 NDUFB8O95169 186 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 MSMBP08118 114 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 PSG1P11464 419 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 CRYBB3P26998 211 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 BRS3P32247 399 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 GPX4P36969 197 aaPredicted RBP2.71□□□□□ -1.97
LIG4-205ENST00000614526 TMEM241Q24JQ0 296 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 RNF212Q495C1 297 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 Q56UQ5 140 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 UNQ5815/PRO19632Q6UWF5 114 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 LCNL1Q6ZST4 164 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 Q8N9W7 124 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 NHLRC2Q8NBF2 726 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 MALSU1Q96EH3 234 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 DUX5Q96PT3 197 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 ASCL2Q99929 193 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 UNKLQ9H9P5 680 aaKnown RBP2.71□□□□□ -1.97
LIG4-205ENST00000614526 MLXQ9UH92 298 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 CUBNO60494 3623 aa2.71□□□□□ -1.97
LIG4-205ENST00000614526 IGHV3-49A0A0A0MS15 119 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 TGIF2-C20orf24A0A0A6YYL0 155 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 IGHV7-81A0A0B4J1V7 117 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 TRAV34A0A0B4J273 112 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 IGHV1-69DA0A0B4J2H0 117 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 H3BUX3 64 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 K7EIM0 57 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 ATP6V0E1O15342 81 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 IGHV1-69P01742 117 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 CTRB1P17538 263 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 UBE2L3P68036 154 aaKnown RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 PAX8Q06710 450 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 MINOS1Q5TGZ0 78 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 CTRB2Q6GPI1 263 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 ZNF562Q6V9R5 426 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 Q6ZS46 218 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 NOL4LQ96MY1 436 aaPredicted RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 SDF2L1Q9HCN8 221 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 TECRQ9NZ01 308 aaKnown RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 MINOS1-NBL1R4GNA1 71 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 TRBV20OR9-2A0A075B6H5 130 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 IGHV3-66A0A0C4DH42 116 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 VWC2LB2RUY7 222 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 I3L2K1 104 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 SMAD7O15105 426 aaKnown RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 GNG7O60262 68 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 NDUFA3O95167 84 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 CXCL1P09341 107 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 RD3LP0DJH9 198 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 C8orf88P0DMB2 117 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 MAS1LP35410 378 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 RPS10P46783 165 aaKnown RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 RPL23P62829 140 aaKnown RBP2.71□□□□□ -1.98
LIG4-205ENST00000614526 BLCAPP62952 87 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 GNG5P63218 68 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 OR5I1Q13606 314 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 IL17RELQ6ZVW7 336 aa2.71□□□□□ -1.98
LIG4-205ENST00000614526 MRPL41Q8IXM3 137 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms