RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 IGKV3-20P01619 116 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 AKR1C2P52895 323 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 NEDD8Q15843 81 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 C1orf134Q5TEV5 83 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 FAM222AQ5U5X8 452 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 PRSS54Q6PEW0 395 aa16.61■□□□□ 0.25
MMP28-203ENST00000612672 NARS2Q96I59 477 aaKnown RBP16.61■□□□□ 0.25
MMP28-203ENST00000612672 IGHV3OR16-12A0A075B7B8 117 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 NXPH3O95157 252 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 SUB1P53999 127 aaKnown RBP eCLIP16.6■□□□□ 0.25
MMP28-203ENST00000612672 RND3P61587 244 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 DHODHQ02127 395 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 MAPKAPK5-AS1Q8N8E1 139 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 TMEM170AQ8WVE7 144 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 NRN1Q9NPD7 142 aa16.6■□□□□ 0.25
MMP28-203ENST00000612672 TMEM127O75204 238 aa16.59■□□□□ 0.25
MMP28-203ENST00000612672 HTN3P15516 51 aa16.59■□□□□ 0.25
MMP28-203ENST00000612672 RND2P52198 227 aa16.59■□□□□ 0.25
MMP28-203ENST00000612672 NUTF2P61970 127 aaKnown RBP16.59■□□□□ 0.25
MMP28-203ENST00000612672 ZNF709Q8N972 641 aa16.59■□□□□ 0.25
MMP28-203ENST00000612672 PIGPP57054 158 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 SNRPD3P62318 126 aaKnown RBP16.58■□□□□ 0.24
MMP28-203ENST00000612672 SP6Q3SY56 376 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 RNF212Q495C1 297 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 TMEM88Q6PEY1 159 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 SNX29P2Q8IUI4 249 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 OR1S2Q8NGQ3 325 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 FAM210BQ96KR6 192 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 NIPSNAP3BQ9BS92 247 aa16.58■□□□□ 0.24
MMP28-203ENST00000612672 C16orf90A8MZG2 172 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 BUB3O43684 328 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 CDK2AP2O75956 126 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 IL4P05112 153 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 OR10J1P30954 320 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 EIF2B2P49770 351 aaKnown RBP16.57■□□□□ 0.24
MMP28-203ENST00000612672 SOHLH1Q5JUK2 328 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 SIGLEC15Q6ZMC9 328 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 LHFPL1Q86WI0 220 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 RFNGQ9Y644 331 aa16.57■□□□□ 0.24
MMP28-203ENST00000612672 FAT1Q14517 4588 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 TRAV30A0A087WSZ9 112 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 PGAM2P15259 253 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 RCVRNP35243 200 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 YPEL3P61236 119 aaPredicted RBP16.56■□□□□ 0.24
MMP28-203ENST00000612672 PDCD10Q9BUL8 212 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 WDR12Q9GZL7 423 aaKnown RBP16.56■□□□□ 0.24
MMP28-203ENST00000612672 SLC35B3Q9H1N7 401 aa16.56■□□□□ 0.24
MMP28-203ENST00000612672 SEPSECSQ9HD40 501 aaKnown RBP16.56■□□□□ 0.24
MMP28-203ENST00000612672 C3orf85A0A1B0GTC6 90 aa16.55■□□□□ 0.24
MMP28-203ENST00000612672 TMEM189A5PLL7 270 aa16.55■□□□□ 0.24
MMP28-203ENST00000612672 NKX2-1P43699 371 aaPredicted RBP16.55■□□□□ 0.24
MMP28-203ENST00000612672 AP2S1P53680 142 aaPredicted RBP16.55■□□□□ 0.24
MMP28-203ENST00000612672 LSM3P62310 102 aaKnown RBP16.55■□□□□ 0.24
MMP28-203ENST00000612672 Q8WTZ3 238 aa16.55■□□□□ 0.24
MMP28-203ENST00000612672 ENY2Q9NPA8 101 aa16.55■□□□□ 0.24
MMP28-203ENST00000612672 SMIM9A6NGZ8 99 aa16.54■□□□□ 0.24
MMP28-203ENST00000612672 AARDQ4LEZ3 155 aa16.54■□□□□ 0.24
MMP28-203ENST00000612672 RNASE12Q5GAN4 147 aaKnown RBP16.54■□□□□ 0.24
MMP28-203ENST00000612672 CROCCP3Q8IVE0 287 aa16.54■□□□□ 0.24
MMP28-203ENST00000612672 C1orf158Q8N1D5 194 aa16.54■□□□□ 0.24
MMP28-203ENST00000612672 YTHDF1Q9BYJ9 559 aaKnown RBP16.54■□□□□ 0.24
MMP28-203ENST00000612672 TRIM16LQ309B1 348 aa16.53■□□□□ 0.24
MMP28-203ENST00000612672 LHFPL5Q8TAF8 219 aa16.53■□□□□ 0.24
MMP28-203ENST00000612672 SAV1Q9H4B6 383 aaPredicted RBP16.53■□□□□ 0.24
MMP28-203ENST00000612672 SCPEP1Q9HB40 452 aa16.53■□□□□ 0.24
MMP28-203ENST00000612672 YTHDF2Q9Y5A9 579 aaKnown RBP16.53■□□□□ 0.24
MMP28-203ENST00000612672 SCGB2A1O75556 95 aa16.52■□□□□ 0.24
MMP28-203ENST00000612672 UCP1P25874 307 aa16.52■□□□□ 0.24
MMP28-203ENST00000612672 C2orf83Q53S99 150 aa16.52■□□□□ 0.24
MMP28-203ENST00000612672 NPIPB3Q92617 1050 aa16.52■□□□□ 0.24
MMP28-203ENST00000612672 ZNF486Q96H40 463 aaPredicted RBP16.52■□□□□ 0.24
MMP28-203ENST00000612672 COMMD3Q9UBI1 195 aa16.52■□□□□ 0.24
MMP28-203ENST00000612672 RPS10-NUDT3A0A1W2PQS6 291 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 F6UB75 175 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 SOCS3O14543 225 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 TOMM40O96008 361 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 HTR2BP41595 481 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 SPCS3P61009 180 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 OXA1LQ15070 435 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 OR4D10Q8NGI6 311 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 OR51G1Q8NGK1 321 aa16.51■□□□□ 0.23
MMP28-203ENST00000612672 LOC102723971A0A1B0GUV8 181 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 PSG1P11464 419 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 ELK1P19419 428 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 ZNF79Q15937 498 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 YIPF6Q96EC8 236 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 LINC00052Q96N35 136 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 KLK11Q9UBX7 282 aa16.5■□□□□ 0.23
MMP28-203ENST00000612672 CD3DP04234 171 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 PRM2P04554 102 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 SLC25A4P12235 298 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 FOXI2Q6ZQN5 318 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 SLC24A4Q8NFF2 622 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 OR4B1Q8NGF8 309 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 RRNAD1Q96FB5 475 aaKnown RBP16.49■□□□□ 0.23
MMP28-203ENST00000612672 ACY3Q96HD9 319 aa16.49■□□□□ 0.23
MMP28-203ENST00000612672 HEYLQ9NQ87 328 aaPredicted RBP16.49■□□□□ 0.23
MMP28-203ENST00000612672 TEX48A0A1B0GUV7 120 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 APOA1P02647 267 aa16.48■□□□□ 0.23
MMP28-203ENST00000612672 RD3LP0DJH9 198 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms