RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PVRIGQ6DKI7 326 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 OR2T10Q8NGZ9 312 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 CORTO00230 105 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 PPP1R2P9O14990 202 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 ORM2P19652 201 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 HOXA5P20719 270 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 ZFP36P26651 326 aaKnown RBP10.87□□□□□ -0.67
NEK3-205ENST00000610828 HES1Q14469 280 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 CFHR4Q92496 578 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 NIT2Q9NQR4 276 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 A6NNC1 897 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 PYYP10082 97 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 SSX2Q16385 188 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 TMEM116Q8NCL8 245 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
NEK3-205ENST00000610828 A0A1W2PRE2 83 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 HELTA6NFD8 242 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 C9JCJ5 164 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 K7EN84 100 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 PHOX2AO14813 284 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 NBR2O15453 112 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 GGCTO75223 188 aaKnown RBP10.85□□□□□ -0.67
NEK3-205ENST00000610828 TEX38Q6PEX7 206 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 OR1B1Q8NGR6 318 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 CACNA1AO00555 2505 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 A0A0U1RQK1 487 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
NEK3-205ENST00000610828 EFNA4P52798 201 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 LCN2P80188 198 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 EAF1Q96JC9 268 aaPredicted RBP10.85□□□□□ -0.67
NEK3-205ENST00000610828 PAXXQ9BUH6 204 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 WNK2Q9Y3S1 2297 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 AKAP6Q13023 2319 aa10.85□□□□□ -0.67
NEK3-205ENST00000610828 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
NEK3-205ENST00000610828 GNG4P50150 75 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 OR10G8Q8NGN5 311 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 SGMS2Q8NHU3 365 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 TRGV9Q99603 122 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 OR51M1Q9H341 326 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
NEK3-205ENST00000610828 ABCA1O95477 2261 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 IFITM10A6NMD0 228 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
NEK3-205ENST00000610828 FBLN7Q53RD9 439 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 PDZD11Q5EBL8 140 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 FAM103A1Q9BTL3 118 aaKnown RBP10.84□□□□□ -0.67
NEK3-205ENST00000610828 MED13LQ71F56 2210 aa10.84□□□□□ -0.67
NEK3-205ENST00000610828 COL12A1Q99715 3063 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 LY96Q9Y6Y9 160 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 VPS13CQ709C8 3753 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
NEK3-205ENST00000610828 S100A12P80511 92 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 FOXL1Q12952 345 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 OR5I1Q13606 314 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 FXYD3Q14802 87 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 CCDC144NLQ6NUI1 221 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 DYNAPQ8N1N2 210 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 KIR3DL3Q8N743 410 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 NPBQ8NG41 125 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 PERPQ96FX8 193 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 IMMP2LQ96T52 175 aa10.83□□□□□ -0.68
NEK3-205ENST00000610828 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 NDUFA3O95167 84 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 BPESC1Q9GZL8 116 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 I3L2K1 104 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 SLC17A3O00476 420 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 TYMSP04818 313 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 PAX2Q02962 417 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 FXYD5Q96DB9 178 aa10.82□□□□□ -0.68
NEK3-205ENST00000610828 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
NEK3-205ENST00000610828 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
NEK3-205ENST00000610828 HYPMO75409 117 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 FABP1P07148 127 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 S100A2P29034 98 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 TIGITQ495A1 244 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 SVIPQ8NHG7 77 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
NEK3-205ENST00000610828 IGLC1P0CG04 106 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 BLNKQ8WV28 456 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 SIRPDQ9H106 197 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 GSN-AS1Q9NRJ2 163 aa10.81□□□□□ -0.68
NEK3-205ENST00000610828 TOX4O94842 621 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 PSG1P11464 419 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 RANP62826 216 aaKnown RBP10.8□□□□□ -0.68
NEK3-205ENST00000610828 ACTL10Q5JWF8 245 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 MINOS1Q5TGZ0 78 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 HIST3H2BBQ8N257 126 aa10.8□□□□□ -0.68
NEK3-205ENST00000610828 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms